RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 DCSTAMPQ9H295 470 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 GPN2Q9H9Y4 310 aaPredicted RBP15.46■□□□□ 0.07
CTCF-201ENST00000264010 TIGARQ9NQ88 270 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 ENPP5Q9UJA9 477 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 AP3D1O14617 1153 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 ACTR1BP42025 376 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 GZMMP51124 257 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 LBX1P52954 281 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 RAB8AP61006 207 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 ACTR1AP61163 376 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 TARDBPQ13148 414 aaKnown RBP eCLIP15.46■□□□□ 0.07
CTCF-201ENST00000264010 ZNF852Q6ZMS4 543 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 C10orf111Q8N326 155 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 SPERTQ8NA61 448 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 JPH3Q8WXH2 748 aaPredicted RBP15.46■□□□□ 0.07
CTCF-201ENST00000264010 TBC1D20Q96BZ9 403 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 CRELD1Q96HD1 420 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 LRRC3BQ96PB8 259 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 DPH7Q9BTV6 452 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 RHBGQ9H310 441 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 MGAT4BQ9UQ53 548 aa15.46■□□□□ 0.07
CTCF-201ENST00000264010 GLOD5A6NK44 160 aa15.46■□□□□ 0.06
CTCF-201ENST00000264010 CLEC3AO75596 197 aa15.46■□□□□ 0.06
CTCF-201ENST00000264010 S100A6P06703 90 aa15.46■□□□□ 0.06
CTCF-201ENST00000264010 OR12D1P0DN82 309 aa15.46■□□□□ 0.06
CTCF-201ENST00000264010 MYL12AP19105 171 aa15.46■□□□□ 0.06
CTCF-201ENST00000264010 GARNL3Q5VVW2 1013 aa15.46■□□□□ 0.06
CTCF-201ENST00000264010 CHMP1BQ7LBR1 199 aa15.46■□□□□ 0.06
CTCF-201ENST00000264010 ADGRD2Q7Z7M1 963 aa15.46■□□□□ 0.06
CTCF-201ENST00000264010 FAM20CQ8IXL6 584 aa15.46■□□□□ 0.06
CTCF-201ENST00000264010 KLHDC8AQ8IYD2 350 aa15.46■□□□□ 0.06
CTCF-201ENST00000264010 SLC38A4Q969I6 547 aa15.46■□□□□ 0.06
CTCF-201ENST00000264010 ING4Q9UNL4 249 aa15.46■□□□□ 0.06
CTCF-201ENST00000264010 LYVE1Q9Y5Y7 322 aa15.46■□□□□ 0.06
CTCF-201ENST00000264010 SSNA1O43805 119 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 SCN2BO60939 215 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 GGT2P36268 569 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 SLC15A1P46059 708 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 SLAMF1Q13291 335 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 FBXO43Q4G163 708 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 C11orf88Q6PI97 169 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 PLEKHG7Q6ZR37 379 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 ZNF655Q8N720 491 aaPredicted RBP15.45■□□□□ 0.06
CTCF-201ENST00000264010 OR4E2Q8NGC2 313 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 OR56A1Q8NGH5 318 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 RERGQ96A58 199 aaPredicted RBP15.45■□□□□ 0.06
CTCF-201ENST00000264010 RSPRY1Q96DX4 576 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 WDR34Q96EX3 536 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 OR2M4Q96R27 311 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 TIMM29Q9BSF4 260 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 LMAN2LQ9H0V9 348 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 TM7SF3Q9NS93 570 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 TMEFF2Q9UIK5 374 aaPredicted RBP15.45■□□□□ 0.06
CTCF-201ENST00000264010 POU2F2P09086 479 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 NTSR1P30989 418 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 PRDX1Q06830 199 aaKnown RBP15.45■□□□□ 0.06
CTCF-201ENST00000264010 SPATC1Q76KD6 591 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 SLC34A3Q8N130 599 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 NECTIN3Q9NQS3 549 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 TMEM184CQ9NVA4 438 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 NDUFAF4Q9P032 175 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 PCDHGA2Q9Y5H1 932 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 NINQ8N4C6 2090 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 RPLP0P05388 317 aaKnown RBP15.45■□□□□ 0.06
CTCF-201ENST00000264010 FCER2P06734 321 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 EN2P19622 333 aaPredicted RBP15.45■□□□□ 0.06
CTCF-201ENST00000264010 ACADLP28330 430 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 XKP51811 444 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 KCNJ10P78508 379 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 REEP5Q00765 189 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 LASP1Q14847 261 aaKnown RBP15.45■□□□□ 0.06
CTCF-201ENST00000264010 NCF4Q15080 339 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 DIRAS2Q96HU8 199 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 INSM2Q96T92 566 aaPredicted RBP15.45■□□□□ 0.06
CTCF-201ENST00000264010 FAM83CQ9BQN1 747 aa15.45■□□□□ 0.06
CTCF-201ENST00000264010 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.45■□□□□ 0.06
CTCF-201ENST00000264010 LRRC72A6NJI9 287 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 TLR4O00206 839 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 PTPN6P29350 595 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 E2F2Q14209 437 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 DUSP6Q16828 381 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 TPRG1LQ5T0D9 272 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 NDUFAF5Q5TEU4 345 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 SAMD14Q8IZD0 417 aaPredicted RBP15.44■□□□□ 0.06
CTCF-201ENST00000264010 DENND6BQ8NEG7 585 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 OR9Q2Q8NGE9 314 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 TEX47Q8TBZ9 253 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 RNFT2Q96EX2 444 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 IL4I1Q96RQ9 567 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 BARD1Q99728 777 aaKnown RBP15.44■□□□□ 0.06
CTCF-201ENST00000264010 SLC23A2Q9UGH3 650 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 CLEC4AQ9UMR7 237 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 SH2B3Q9UQQ2 575 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 FAM172BPA6NC97 362 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 PLPP1O14494 284 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 IFNA16P05015 189 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 ZNF613Q6PF04 617 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 SLC38A2Q96QD8 506 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 CDADC1Q9BWV3 514 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 TTYH1Q9H313 450 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms