RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 PAMR1Q6UXH9 720 aa13.71□□□□□ -0.22
SFSWAP-201ENST00000261674 GLCCI1Q86VQ1 547 aa13.71□□□□□ -0.22
SFSWAP-201ENST00000261674 C7orf57Q8NEG2 295 aa13.71□□□□□ -0.22
SFSWAP-201ENST00000261674 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.71□□□□□ -0.229e-8■■■■■ 144.4
SFSWAP-201ENST00000261674 CUEDC1Q9NWM3 386 aaPredicted RBP13.71□□□□□ -0.22
SFSWAP-201ENST00000261674 CMAHPQ9Y471 501 aa13.71□□□□□ -0.22
SFSWAP-201ENST00000261674 KIAA1671Q9BY89 1806 aa13.71□□□□□ -0.22
SFSWAP-201ENST00000261674 HEPACAM2A8MVW5 462 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 QSOX1O00391 747 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 SCAMP1O15126 338 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 PDPK1O15530 556 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 NTN1O95631 604 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 MYL12AP19105 171 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 RFX2P48378 723 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 CCT3P49368 545 aaKnown RBP13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 PNLIPRP1P54315 467 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 ACSM5Q6NUN0 579 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 PHC2Q8IXK0 858 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 ART5Q96L15 291 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 MND1Q9BWT6 205 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 RSPO3Q9BXY4 272 aaPredicted RBP13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 MYNNQ9NPC7 610 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 SEC14L4Q9UDX3 406 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 CLCA3PQ9Y6N3 262 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 SOX1O00570 391 aaPredicted RBP13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 SEMA3DO95025 777 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 RPL3P39023 403 aaKnown RBP13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 OPRD1P41143 372 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 ETV5P41161 510 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 ETV1P50549 477 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 PCBP3P57721 371 aaKnown RBP13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 LARS2Q15031 903 aaKnown RBP13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 ZNF79Q15937 498 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 SNAP47Q5SQN1 464 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 SYCE2Q6PIF2 218 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 PARS2Q7L3T8 475 aaKnown RBP13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 VASH1Q7L8A9 365 aaPredicted RBP13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 ABI3BPQ7Z7G0 1075 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 LAPTM4BQ86VI4 370 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 C12orf40Q86WS4 652 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 OR8J1Q8NGP2 316 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 GOT1L1Q8NHS2 421 aaPredicted RBP13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 ENKURQ8TC29 256 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 C19orf43Q9BQ61 176 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 CCDC32Q9BV29 185 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 TBC1D17Q9HA65 648 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 EQTNQ9NQ60 294 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 STUB1Q9UNE7 303 aa13.7□□□□□ -0.22
SFSWAP-201ENST00000261674 PLPP1O14494 284 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 ADAP00813 363 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 C8orf89P0DMQ9 161 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 HMGA2P52926 109 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 C21orf58P58505 322 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 HOXC5Q00444 222 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 ZNF805Q5CZA5 627 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 PODNL1Q6PEZ8 512 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 ASCC1Q8N9N2 400 aaKnown RBP13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 GFM1Q96RP9 751 aaKnown RBP13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 NELL2Q99435 816 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 TTYH1Q9H313 450 aaPredicted RBP13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 SPHK2Q9NRA0 654 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 TXNL4BQ9NX01 149 aaKnown RBP13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 NDUFB5O43674 189 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 KLHL18O94889 574 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 EPHX1P07099 455 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 RAB30Q15771 203 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 NDUFA5Q16718 116 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 DUSP6Q16828 381 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 RRM2BQ7LG56 351 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 SLC9B2Q86UD5 537 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 NLRP8Q86W28 1048 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 C17orf64Q86WR6 236 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 LAS2Q8IYD9 372 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 OR4K5Q8NGD3 323 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 CXorf40BQ96DE9 158 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 METTL2AQ96IZ6 378 aaKnown RBP13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 SLC6A18Q96N87 628 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 TREX2Q9BQ50 279 aaPredicted RBP13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 C11orf54Q9H0W9 315 aaPredicted RBP13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 ZCCHC3Q9NUD5 404 aaKnown RBP13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 AHSPQ9NZD4 102 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 REV1Q9UBZ9 1251 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 SLC35F4A4IF30 521 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 E9PQ18 207 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 OR1F1O43749 312 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 EIF2S1P05198 315 aaKnown RBP13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 ILKQ13418 452 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 NCF4Q15080 339 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 PGBD2Q6P3X8 592 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 KRT78Q8N1N4 520 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 AMER3Q8N944 861 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 ATP6V1C2Q8NEY4 427 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 PDXPQ96GD0 296 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 ZNF607Q96SK3 696 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 HDHD5Q9BXW7 423 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 PLA2G2FQ9BZM2 168 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 EGLN3Q9H6Z9 239 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 ANKRA2Q9H9E1 313 aa13.69□□□□□ -0.22
SFSWAP-201ENST00000261674 TEX10Q9NXF1 929 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms