RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ATAD3CQ5T2N8 411 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 PLEKHG7Q6ZR37 379 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 TMPPEQ6ZT21 453 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 TMEM25Q86YD3 366 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 TIGD4Q8IY51 512 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 IQCF1Q8N6M8 205 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 RDH8Q9NYR8 311 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 KCMF1Q9P0J7 381 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 DNMT3AQ9Y6K1 912 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-201ENST00000261037 CD3GP09693 182 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 PORP16435 677 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-201ENST00000261037 OXTRP30559 389 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 CTBP2P56545 445 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 RBM39Q14498 530 aaKnown RBP11.54□□□□□ -0.56
COL8A1-201ENST00000261037 CLCA4Q14CN2 919 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.54□□□□□ -0.56
COL8A1-201ENST00000261037 UBE2UQ5VVX9 321 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 ZER1Q7Z7L7 766 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 KCNN3Q9UGI6 736 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 DLX2Q07687 328 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-201ENST00000261037 GBX1Q14549 363 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 NIPAL1Q6NVV3 410 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 TMEM151BQ8IW70 566 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 C16orf78Q8WTQ4 265 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 RADILQ96JH8 1075 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 NEDD4LQ96PU5 975 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 RNF38Q9H0F5 515 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 PCDHB16Q9NRJ7 776 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 GPR83Q9NYM4 423 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 GPRC5BQ9NZH0 403 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 NUP188Q5SRE5 1749 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 A0A1B0GV50 99 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 LAMTOR5O43504 91 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 RP2O75695 350 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 MT-ND2P03891 347 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 GSTT2P0CG29 244 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 PYCR1P32322 319 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 GGT2P36268 569 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 DPP6P42658 865 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 IGFN1Q86VF2 1251 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 OR4K13Q8NH42 304 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 PITX2Q99697 317 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 INPP5KQ9BT40 448 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 TMEM185BQ9H7F4 350 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 A0A0A6YYH2 397 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 A6NJ64 397 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 FAM171A2A8MVW0 826 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 KIAA0513O60268 411 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 FRKP42685 505 aaPredicted RBP11.53□□□□□ -0.56
COL8A1-201ENST00000261037 CRISP1P54107 249 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 HHEXQ03014 270 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 RUNX3Q13761 415 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 KCTD18Q6PI47 426 aaPredicted RBP11.53□□□□□ -0.56
COL8A1-201ENST00000261037 RHEBL1Q8TAI7 183 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 KCNN1Q92952 543 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 TRIB3Q96RU7 358 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 CNN2Q99439 309 aaKnown RBP11.53□□□□□ -0.56
COL8A1-201ENST00000261037 GMLQ99445 158 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 CLCA1A8K7I4 914 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 INMT-MINDY4F8WBC2 141 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 RNH1P13489 461 aaKnown RBP11.53□□□□□ -0.56
COL8A1-201ENST00000261037 PGCP20142 388 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 HTR1EP28566 365 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 LSSP48449 732 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 FOXK1P85037 733 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 RING1Q06587 406 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 DIO2Q92813 273 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 DAZLQ92904 295 aaKnown RBP11.53□□□□□ -0.56
COL8A1-201ENST00000261037 PAK1IP1Q9NWT1 392 aaPredicted RBP11.53□□□□□ -0.56
COL8A1-201ENST00000261037 ERVK13-1Q9NX77 482 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF487B1APH4 448 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 TOXO94900 526 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 TAS2R38P59533 333 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 PIGGQ5H8A4 983 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 ZC3H14Q6PJT7 736 aaKnown RBP11.53□□□□□ -0.56
COL8A1-201ENST00000261037 SLC39A5Q6ZMH5 540 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 PRR22Q8IZ63 422 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 SCGB1C1Q8TD33 95 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 APIPQ96GX9 242 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 LRR1Q96L50 414 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 HDHD5Q9BXW7 423 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 KCNK13Q9HB14 408 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 VIRMAQ69YN4 1812 aaKnown RBP11.53□□□□□ -0.56
COL8A1-201ENST00000261037 AKR1C4P17516 323 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 RAB28P51157 221 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 FAM189BP81408 668 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 UGT3A2Q3SY77 523 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 ZC3H3Q8IXZ2 948 aaKnown RBP11.53□□□□□ -0.56
COL8A1-201ENST00000261037 B4GALT7Q9UBV7 327 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 KLHL21Q9UJP4 597 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 PIAS3Q9Y6X2 628 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 RGPD1P0DJD0 1748 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 M0R233 179 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 PCDH17O14917 1159 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 MITFO75030 526 aaPredicted RBP11.53□□□□□ -0.56
COL8A1-201ENST00000261037 ATE1O95260 518 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 ADRB3P13945 408 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 HSD3B2P26439 372 aa11.53□□□□□ -0.56
COL8A1-201ENST00000261037 RIDAP52758 137 aaKnown RBP11.53□□□□□ -0.56
COL8A1-201ENST00000261037 RHEBQ15382 184 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms