RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ZNF639Q9UID6 485 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 ZNF780BQ9Y6R6 833 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 AZIN1O14977 448 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 TYROBPO43914 113 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 RSL1D1O76021 490 aaKnown RBP21.17■□□□□ 0.98
LSM4-201ENST00000252816 CLDN1O95832 211 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 CHRNGP07510 517 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 FBXO45P0C2W1 286 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 CNR1P21554 472 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 NR0B1P51843 470 aaKnown RBP21.17■□□□□ 0.98
LSM4-201ENST00000252816 C3AR1Q16581 482 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 CMPK2Q5EBM0 449 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 C6orf163Q5TEZ5 329 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 TMEM64Q6YI46 380 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 FGD2Q7Z6J4 655 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 SPPL2CQ8IUH8 684 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 GHDCQ8N2G8 530 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 LRRC25Q8N386 305 aaPredicted RBP21.17■□□□□ 0.98
LSM4-201ENST00000252816 EXOSC8Q96B26 276 aaKnown RBP21.17■□□□□ 0.98
LSM4-201ENST00000252816 CTHRC1Q96CG8 243 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 SACM1LQ9NTJ5 587 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 SH3BGRL2Q9UJC5 107 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 DTX4Q9Y2E6 619 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 EML6Q6ZMW3 1958 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 CROCCQ5TZA2 2017 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 MYO7BQ6PIF6 2116 aa21.17■□□□□ 0.98
LSM4-201ENST00000252816 ZG16O60844 167 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 DNASE1L1P49184 302 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 PER3P56645 1201 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 HEPACAMQ14CZ8 416 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 EXOSC7Q15024 291 aaKnown RBP21.16■□□□□ 0.98
LSM4-201ENST00000252816 PRSS53Q2L4Q9 553 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 Q6ZPB1 254 aaPredicted RBP21.16■□□□□ 0.98
LSM4-201ENST00000252816 ZCCHC23Q6ZST2 131 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 OR10G3Q8NGC4 313 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 OR52N2Q8NGI0 321 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.16■□□□□ 0.98
LSM4-201ENST00000252816 PAQR8Q8TEZ7 354 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 TP53INP1Q96A56 240 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 MAGED4Q96JG8 741 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 TUBB1Q9H4B7 451 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 RRAGDQ9NQL2 400 aaPredicted RBP21.16■□□□□ 0.98
LSM4-201ENST00000252816 TINAGQ9UJW2 476 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 FIS1Q9Y3D6 152 aa21.16■□□□□ 0.98
LSM4-201ENST00000252816 POLR3HQ9Y535 204 aaPredicted RBP21.16■□□□□ 0.98
LSM4-201ENST00000252816 NPHS1O60500 1241 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 GLSO94925 669 aaPredicted RBP21.15■□□□□ 0.98
LSM4-201ENST00000252816 CBX7O95931 251 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 P04436 131 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 PCSK2P16519 638 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 GPX3P22352 226 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 PIGAP37287 484 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 PPIAP62937 165 aaKnown RBP21.15■□□□□ 0.98
LSM4-201ENST00000252816 MRPS35P82673 323 aaKnown RBP21.15■□□□□ 0.98
LSM4-201ENST00000252816 ZNF763Q0D2J5 394 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 FOXO1Q12778 655 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 KIAA0040Q15053 153 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 TRMT12Q53H54 448 aaKnown RBP21.15■□□□□ 0.98
LSM4-201ENST00000252816 ARL13AQ5H913 290 aaPredicted RBP21.15■□□□□ 0.98
LSM4-201ENST00000252816 HLA-DQA1Q5Y7H0 255 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 SLC22A10Q63ZE4 541 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 KANK2Q63ZY3 851 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 BNC2Q6ZN30 1099 aaPredicted RBP21.15■□□□□ 0.98
LSM4-201ENST00000252816 FAM47EQ6ZV65 393 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 CCDC116Q8IYX3 515 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 TAGAPQ8N103 731 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 CDC26Q8NHZ8 85 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 ZBTB9Q96C00 473 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 FAM173AQ9BQD7 235 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 TTTY12Q9BZ98 90 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 PROK2Q9HC23 129 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 PFDN4Q9NQP4 134 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 SLC35C2Q9NQQ7 365 aa21.15■□□□□ 0.98
LSM4-201ENST00000252816 CHCHD2Q9Y6H1 151 aaPredicted RBP21.15■□□□□ 0.98
LSM4-201ENST00000252816 FAM166BA8MTA8 275 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 TMEM233B4DJY2 109 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 CCL21O00585 134 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 PRPH2P23942 346 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 ARRB2P32121 409 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 ETV4P43268 484 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 GSTM5P46439 218 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 PLGLB1Q02325 96 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 C2orf80Q0P641 193 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 NTRK2Q16620 822 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 ZNF628Q5EBL2 1059 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 FAM71E1Q6IPT2 247 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 NOXRED1Q6NXP6 359 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 GK5Q6ZS86 529 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 Q6ZSR9 355 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 DND1Q8IYX4 353 aaKnown RBP21.14■□□□□ 0.97
LSM4-201ENST00000252816 FAM13CQ8NE31 585 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 OR5M3Q8NGP4 307 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 OR9A2Q8NGT5 310 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 OR2T11Q8NH01 316 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 FAM76AQ8TAV0 307 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 DEFB127Q9H1M4 99 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 ANKRA2Q9H9E1 313 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 PLSCR2Q9NRY7 297 aa21.14■□□□□ 0.97
LSM4-201ENST00000252816 TUBA8Q9NY65 449 aaPredicted RBP21.14■□□□□ 0.97
LSM4-201ENST00000252816 EHD3Q9NZN3 535 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms