RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 TMEM121BQ9BXQ6 578 aaPredicted RBP16.08■□□□□ 0.16
FOXA1-201ENST00000250448 SNTG1Q9NSN8 517 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 RAB23Q9ULC3 237 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 KNL1Q8NG31 2342 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 A0A1W2PQ09 198 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 SLCO2B1O94956 709 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 AP2A2O94973 939 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 RACK1P63244 317 aaKnown RBP16.08■□□□□ 0.16
FOXA1-201ENST00000250448 ZNF770Q6IQ21 691 aaPredicted RBP16.08■□□□□ 0.16
FOXA1-201ENST00000250448 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.08■□□□□ 0.16
FOXA1-201ENST00000250448 TRMT61AQ96FX7 289 aaKnown RBP16.08■□□□□ 0.16
FOXA1-201ENST00000250448 DNAJC27Q9NZQ0 273 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 CLEC2DQ9UHP7 191 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 STUB1Q9UNE7 303 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 DSPPQ9NZW4 1301 aa16.08■□□□□ 0.16
FOXA1-201ENST00000250448 MEIOCA2RUB1 952 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 HMX3A6NHT5 357 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 ZNF670-ZNF695F2Z2N8 137 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 RECKO95980 971 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 IFNW1P05000 195 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TRAPPC2P0DI81 140 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TRAPPC2BP0DI82 140 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 MEDAGQ5VYS4 303 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 VN1R5Q7Z5H4 357 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 SLC34A3Q8N130 599 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 SIX5Q8N196 739 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 PPCDCQ96CD2 204 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 RACGAP1Q9H0H5 632 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TBC1D3DA0A087WVF3 549 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TBC1D3IA0A087WXS9 549 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TBC1D3EA0A087X179 549 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TBC1D3KA0A087X1G2 549 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 LINC00854A0A1B0GVQ3 168 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 A0A1W2PQU0 124 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 SLC35F4A4IF30 521 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TBC1D3FA6NER0 549 aaPredicted RBP16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TBC1D3LB9A6J9 549 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 GPR37L1O60883 481 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 LILRB5O75023 590 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TBC1D3HP0C7X1 549 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 PSMA1P25786 263 aaKnown RBP16.07■□□□□ 0.16
FOXA1-201ENST00000250448 SOAT1P35610 550 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 CRYBB2P43320 205 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 RPS5P46782 204 aaKnown RBP16.07■□□□□ 0.16
FOXA1-201ENST00000250448 SNRPGP62308 76 aaKnown RBP16.07■□□□□ 0.16
FOXA1-201ENST00000250448 MC1RQ01726 317 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 RUNX1T1Q06455 604 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 DPTQ07507 201 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 SMAD4Q13485 552 aaKnown RBP16.07■□□□□ 0.16
FOXA1-201ENST00000250448 NFE2L1Q14494 772 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 SPHARQ15513 63 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TCEA2Q15560 299 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TAB1Q15750 504 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 SLC5A12Q1EHB4 618 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TBC1D3GQ6DHY5 549 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TBC1D3CQ6IPX1 549 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 MED27Q6P2C8 311 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 KIAA1324Q6UXG2 1013 aaKnown RBP16.07■□□□□ 0.16
FOXA1-201ENST00000250448 Q6ZS52 159 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TBC1D3Q8IZP1 549 aaPredicted RBP16.07■□□□□ 0.16
FOXA1-201ENST00000250448 SIMC1Q8NDZ2 872 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 OR56A3Q8NH54 315 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.07■□□□□ 0.16
FOXA1-201ENST00000250448 KLHL6Q8WZ60 621 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 TMEM80Q96HE8 168 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 CMAHPQ9Y471 501 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 PCM1Q15154 2024 aa16.07■□□□□ 0.16
FOXA1-201ENST00000250448 SLC31A1O15431 190 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 CATP04040 527 aaKnown RBP16.06■□□□□ 0.16
FOXA1-201ENST00000250448 GBAP04062 536 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 FURINP09958 794 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 IMPA1P29218 277 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 SLAMF1Q13291 335 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 PDE7AQ13946 482 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 IRF4Q15306 451 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 MPEG1Q2M385 716 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 LEXMQ3ZCV2 418 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 ZNF765Q7L2R6 523 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 COMMD6Q7Z4G1 85 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 TMPRSS11BQ86T26 416 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 TIGARQ9NQ88 270 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 KCND3Q9UK17 655 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 COL4A2P08572 1712 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 HYKKA2RU49 373 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 LATO43561 262 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 POP7O75817 140 aaKnown RBP16.06■□□□□ 0.16
FOXA1-201ENST00000250448 ADAP00813 363 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 PPP2CBP62714 309 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 PPP2CAP67775 309 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 TMEM201Q5SNT2 666 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 SIPA1Q96FS4 1042 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 TMEM246Q9BRR3 403 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 MND1Q9BWT6 205 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 PHF7Q9BWX1 381 aaPredicted RBP16.06■□□□□ 0.16
FOXA1-201ENST00000250448 NDUFB11Q9NX14 153 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 CARD8Q9Y2G2 431 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 BOLA1Q9Y3E2 137 aa16.06■□□□□ 0.16
FOXA1-201ENST00000250448 TRBV4-1A0A0J9YWV2 114 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 IQCMA0A1B0GVH7 501 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 SLC5A10A0PJK1 596 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms