RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PTCHD4Q6ZW05 846 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 IKBIPQ70UQ0 350 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 ZNF367Q7RTV3 350 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 PDZD3Q86UT5 571 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 TP53INP1Q96A56 240 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 COX14Q96I36 57 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 RHBGQ9H310 441 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 DPEP2Q9H4A9 486 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 RANGRFQ9HD47 186 aaPredicted RBP9.57□□□□□ -0.88
COPB1-201ENST00000249923 MAPRE3Q9UPY8 281 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 ANGPT4Q9Y264 503 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 PCDHGB6Q9Y5F9 930 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 V9GYH0 126 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 H7BY64 318 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 HAT1O14929 419 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 ADH5P11766 374 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 PTX3P26022 381 aaPredicted RBP9.57□□□□□ -0.88
COPB1-201ENST00000249923 BMPR1AP36894 532 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 ALDH9A1P49189 494 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 VASPP50552 380 aaPredicted RBP9.57□□□□□ -0.88
COPB1-201ENST00000249923 ZNF750Q32MQ0 723 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 FBXO43Q4G163 708 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 LCTLQ6UWM7 567 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 UNC5DQ6UXZ4 953 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 C6orf120Q7Z4R8 191 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 NACC2Q96BF6 587 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 CHFRQ96EP1 664 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 PRAP1Q96NZ9 151 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 TREX2Q9BQ50 279 aaPredicted RBP9.57□□□□□ -0.88
COPB1-201ENST00000249923 PRR14Q9BWN1 585 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 CRISPLD2Q9H0B8 497 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 CPNE5Q9HCH3 593 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 CNOT2Q9NZN8 540 aaKnown RBP9.57□□□□□ -0.88
COPB1-201ENST00000249923 SPEF1Q9Y4P9 236 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 HSPB11Q9Y547 144 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 N6AMT1Q9Y5N5 214 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 KIAA0100Q14667 2235 aaKnown RBP9.56□□□□□ -0.88
COPB1-201ENST00000249923 C17orf113A0A1B0GUU1 675 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 CAPN5O15484 640 aaPredicted RBP9.56□□□□□ -0.88
COPB1-201ENST00000249923 LATO43561 262 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 PRKYO43930 277 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 SCO1O75880 301 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 TIMP1P01033 207 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 SERPIND1P05546 499 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 TNNI3P19429 210 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 ZNF79Q15937 498 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 ZFP41Q8N8Y5 198 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 OR8H1Q8NGG4 311 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 C1GALT1C1Q96EU7 318 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 TXNDC15Q96J42 360 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 MAPKAP1Q9BPZ7 522 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 PLA2G12AQ9BZM1 189 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 MUTYHQ9UIF7 546 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 TRPM6Q9BX84 2022 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 MYO9BQ13459 2157 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 ANKDD1BA6NHY2 528 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 SCG5P05408 212 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 OSMP13725 252 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 KCNJ5P48544 419 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 MAN2A2P49641 1150 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 MAPK12P53778 367 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 CAV3P56539 151 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 CDC42P60953 191 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 EFNB1P98172 346 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 MLF2Q15773 248 aaPredicted RBP9.56□□□□□ -0.88
COPB1-201ENST00000249923 HNRNPA1L2Q32P51 320 aaKnown RBP9.56□□□□□ -0.88
COPB1-201ENST00000249923 CCDC58Q4VC31 144 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 TMEM201Q5SNT2 666 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 SLX4IPQ5VYV7 408 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 TMPRSS11AQ6ZMR5 421 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 DEF8Q6ZN54 512 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 ERN2Q76MJ5 926 aaKnown RBP9.56□□□□□ -0.88
COPB1-201ENST00000249923 CDH24Q86UP0 819 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 CACUL1Q86Y37 369 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 ASB15Q8WXK1 588 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 EXOSC8Q96B26 276 aaKnown RBP9.56□□□□□ -0.88
COPB1-201ENST00000249923 HDHD2Q9H0R4 259 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 QRSL1Q9H0R6 528 aaKnown RBP9.56□□□□□ -0.88
COPB1-201ENST00000249923 TMEM245Q9H330 911 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 ANKRA2Q9H9E1 313 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 KCNK12Q9HB15 430 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 MAT2BQ9NZL9 334 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 ATG2AQ2TAZ0 1938 aa9.56□□□□□ -0.88
COPB1-201ENST00000249923 MDC1Q14676 2089 aaKnown RBP9.55□□□□□ -0.88
COPB1-201ENST00000249923 ISPDA4D126 451 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 SH3D21A4FU49 640 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 C12orf71A8MTZ7 269 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 TLR4O00206 839 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ZNF197O14709 1029 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ALPPL2P10696 532 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 PIPP12273 146 aaPredicted RBP9.55□□□□□ -0.88
COPB1-201ENST00000249923 DDX6P26196 483 aaKnown RBP eCLIP9.55□□□□□ -0.882e-6■■■□□ 15.8
COPB1-201ENST00000249923 NNMTP40261 264 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 P2RY2P41231 377 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 MAPK9P45984 424 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 SNRPGP62308 76 aaKnown RBP9.55□□□□□ -0.88
COPB1-201ENST00000249923 IFITM2Q01629 132 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ZNF91Q05481 1191 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ILKQ13418 452 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 GPR19Q15760 415 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms