RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 OR4M2Q8NGB6 313 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CYB5D2Q8WUJ1 264 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 ZNF480Q8WV37 535 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 NARS2Q96I59 477 aaKnown RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 SLC46A2Q9BY10 475 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CHIAQ9BZP6 476 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 REEP4Q9H6H4 257 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 BRF2Q9HAW0 419 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CLEC2DQ9UHP7 191 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CYB5R1Q9UHQ9 305 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 ABT1Q9ULW3 272 aaKnown RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CLEC4AQ9UMR7 237 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 A0A0B4J293 547 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CHURC1-FNTBB4DL54 471 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 NEDD8-MDP1E9PL57 170 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 MYL12BO14950 172 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 LEFTY1O75610 366 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 GADD45GO95257 159 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 SOX14O95416 240 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 SYPP08247 313 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 MYL12AP19105 171 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CHMP24386 653 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 SOAT1P35610 550 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 XCR1P46094 333 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 TAS2R50P59544 299 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 RAB8AP61006 207 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 EEF1A2Q05639 463 aaKnown RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 PUM1Q14671 1186 aaKnown RBP eCLIP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 ARSIQ5FYB1 569 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 RPS26P11Q5JNZ5 115 aaPredicted RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 TMEM215Q68D42 235 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 C17orf107Q6ZR85 190 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 FAM92BQ6ZTR7 304 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 TCEAL8Q8IYN2 117 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CPXM2Q8N436 756 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 OR52N2Q8NGI0 321 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 OR56A3Q8NH54 315 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CD99L2Q8TCZ2 262 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 MRPS31Q92665 395 aaKnown RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 RNF31Q96EP0 1072 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CPEB1Q9BZB8 566 aaKnown RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 C11orf16Q9NQ32 467 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 SRRDQ9UH36 339 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 PCDHGB2Q9Y5G2 931 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 TRBC2A0A5B9 178 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 INMT-MINDY4F8WBC2 141 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 LGALS8O00214 317 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 TOR1AO14656 332 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 FFAR1O14842 300 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 SHOXO15266 292 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 SEMA7AO75326 666 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 KLK1P06870 262 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 FURINP09958 794 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 NPPBP16860 134 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 PPIBP23284 216 aaKnown RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CHI3L1P36222 383 aaPredicted RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 LIM2P55344 173 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 ERVK-21P61565 698 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 TBPL1P62380 186 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 DSG2Q14126 1118 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 SLBPQ14493 270 aaKnown RBP eCLIP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 TIMM50Q3ZCQ8 353 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 SPIN4Q56A73 249 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 MPP7Q5T2T1 576 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 BCL2L15Q5TBC7 163 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 DDI2Q5TDH0 399 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 LIPKQ5VXJ0 399 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 MED27Q6P2C8 311 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 TMEM220Q6QAJ8 160 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 KIAA1324Q6UXG2 1013 aaKnown RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 PTCHD4Q6ZW05 846 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 ADGRD2Q7Z7M1 963 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CCDC190Q86UF4 302 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 BEST4Q8NFU0 473 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 OR8K3Q8NH51 312 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 WFDC6Q9BQY6 131 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 WRAP53Q9BUR4 548 aaKnown RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 REPIN1Q9BWE0 567 aaKnown RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 NMNAT1Q9HAN9 279 aaPredicted RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CORO2BQ9UQ03 480 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 LOC105369274A0A096LPK9 316 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 TRBV4-1A0A0J9YWV2 114 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 GSAPA4D1B5 854 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 SLC9A3R1O14745 358 aaPredicted RBP8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 KPNA5O15131 536 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 APOC3P02656 99 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 INHAP05111 366 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 OPRD1P41143 372 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 RORCP51449 518 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 RGS1Q08116 209 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 ZNF763Q0D2J5 394 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 TMEM115Q12893 351 aaPredicted RBP8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 KCNC3Q14003 757 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 FRMPD2BQ6IN97 320 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 TMEM81Q6P7N7 255 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 HDDC2Q7Z4H3 204 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 OR4N4Q8N0Y3 316 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 RAET1EQ8TD07 263 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 C1GALT1C1Q96EU7 318 aa8.91□□□□□ -0.98
HLA-DOA-201ENST00000229829 QRFPRQ96P65 431 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms