RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 DNASE1L3Q13609 305 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 COL9A2Q14055 689 aaPredicted RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 PDSS1Q5T2R2 415 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 NDUFAF5Q5TEU4 345 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 TMPRSS9Q7Z410 1059 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 GPAT4Q86UL3 456 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 TSPYL5Q86VY4 417 aaPredicted RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 ZNF227Q86WZ6 799 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 DTWD1Q8N5C7 304 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 MFSD2AQ8NA29 543 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 FRMD6Q96NE9 622 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 CLSTN3Q9BQT9 956 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 TRPV4Q9HBA0 871 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 PAK1IP1Q9NWT1 392 aaPredicted RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 GJD2Q9UKL4 321 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 PLCL2Q9UPR0 1127 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 ENPP4Q9Y6X5 453 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 HYKKA2RU49 373 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 MAN2B1O00754 1011 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 UGDHO60701 494 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 YES1P07947 543 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 HCKP08631 526 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 NDUFV2P19404 249 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 MAZP56270 477 aaKnown RBP10.96□□□□□ -0.65
NOD1-201ENST00000222823 HNRNPA1L2Q32P51 320 aaKnown RBP10.96□□□□□ -0.65
NOD1-201ENST00000222823 P4HA3Q7Z4N8 544 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 ACBD7Q8N6N7 88 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 ZNF615Q8N8J6 731 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 OR5AR1Q8NGP9 310 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 OR8K3Q8NH51 312 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 HS6ST2Q96MM7 605 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 SLC46A2Q9BY10 475 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 KATNBL1Q9H079 304 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 C5AR2Q9P296 337 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 GPR34Q9UPC5 381 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 CMAHPQ9Y471 501 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 BRWD3Q6RI45 1802 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 WASHC1A8K0Z3 465 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 WASH3PC4AMC7 463 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 HHLA1C9JL84 531 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 ADORA3P0DMS8 318 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 S1PR1P21453 382 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 GPR143P51810 404 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 CRYZQ08257 329 aaKnown RBP10.96□□□□□ -0.65
NOD1-201ENST00000222823 MAD2L1BPQ15013 274 aaPredicted RBP10.96□□□□□ -0.65
NOD1-201ENST00000222823 FAM180BQ6P0A1 224 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 METTL2BQ6P1Q9 378 aaKnown RBP10.96□□□□□ -0.65
NOD1-201ENST00000222823 WASH2PQ6VEQ5 465 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 RNF111Q6ZNA4 994 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 TAS1R1Q7RTX1 841 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 TMED4Q7Z7H5 227 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 LSMEM2Q8N112 164 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 SAMD12Q8N8I0 201 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 OR13J1Q8NGT2 312 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 OR2L8Q8NGY9 312 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 MR1Q95460 341 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 TMEM125Q96AQ2 219 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 TMEM41AQ96HV5 264 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 ORAI3Q9BRQ5 295 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 B3GAT2Q9NPZ5 323 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 UCKL1Q9NWZ5 548 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 ZFR2Q9UPR6 939 aaKnown RBP10.96□□□□□ -0.65
NOD1-201ENST00000222823 ST14Q9Y5Y6 855 aa10.96□□□□□ -0.65
NOD1-201ENST00000222823 SLC1A7O00341 560 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 PPP6CO00743 305 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 TP53I11O14683 189 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 TSPAN9O75954 239 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 KDM4BO94953 1096 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 OXSR1O95747 527 aaPredicted RBP10.96□□□□□ -0.66
NOD1-201ENST00000222823 RETP07949 1114 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 JMJD7P0C870 316 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 NAA10P41227 235 aaPredicted RBP10.96□□□□□ -0.66
NOD1-201ENST00000222823 RGRP47804 291 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 RNF144AP50876 292 aaPredicted RBP10.96□□□□□ -0.66
NOD1-201ENST00000222823 DEFB103AP81534 67 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 PLCXD2Q0VAA5 305 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 LSAMPQ13449 338 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 GAS6Q14393 721 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 SYCE2Q6PIF2 218 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 UGT2A3Q6UWM9 527 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 NAGSQ8N159 534 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 CPXM2Q8N436 756 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 SLC44A3Q8N4M1 653 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 SLC37A3Q8NCC5 494 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 THAP3Q8WTV1 239 aaPredicted RBP10.96□□□□□ -0.66
NOD1-201ENST00000222823 CASD1Q96PB1 797 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 SCGB3A2Q96PL1 93 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 MNTQ99583 582 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 TMEM165Q9HC07 324 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 PREBQ9HCU5 417 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 BAIAP2Q9UQB8 552 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 PLD2O14939 933 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 DUX1O43812 170 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 SEMA4FO95754 770 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 ADAP00813 363 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 SPARCP09486 303 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 CLUP10909 449 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 ZNF140P52738 457 aaPredicted RBP10.96□□□□□ -0.66
NOD1-201ENST00000222823 HHEXQ03014 270 aa10.96□□□□□ -0.66
NOD1-201ENST00000222823 MAB21L1Q13394 359 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms