RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CRB2Q5IJ48 1285 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 ZNF793Q6ZN11 406 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 GPR32P1Q8NGA4 272 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 TRNT1Q96Q11 434 aaKnown RBP12.43□□□□□ -0.42
CTNS-201ENST00000046640 TRMT61BQ9BVS5 477 aaKnown RBP12.43□□□□□ -0.42
CTNS-201ENST00000046640 PRR14Q9BWN1 585 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 AICDAQ9GZX7 198 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 QRSL1Q9H0R6 528 aaKnown RBP12.43□□□□□ -0.42
CTNS-201ENST00000046640 NMNAT1Q9HAN9 279 aaPredicted RBP12.43□□□□□ -0.42
CTNS-201ENST00000046640 PCDHGA3Q9Y5H0 932 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 TBC1D3DA0A087WVF3 549 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 TBC1D3IA0A087WXS9 549 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 TBC1D3EA0A087X179 549 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 TBC1D3KA0A087X1G2 549 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 A0A1W2PQU0 124 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 TBC1D3FA6NER0 549 aaPredicted RBP12.42□□□□□ -0.42
CTNS-201ENST00000046640 TBC1D3LB9A6J9 549 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 C4orf51C9J302 202 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 IDH3BO43837 385 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 APOL3O95236 402 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 TBC1D3HP0C7X1 549 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 ANXA8P13928 327 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 TNFSF8P32971 234 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 PCBP3P57721 371 aaKnown RBP12.42□□□□□ -0.42
CTNS-201ENST00000046640 DEFA1P59665 94 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 DEFA3P59666 94 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 GPR19Q15760 415 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 FAM214AQ32MH5 1076 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 NDUFAF5Q5TEU4 345 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 TBC1D3GQ6DHY5 549 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 TBC1D3CQ6IPX1 549 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 PAQR6Q6TCH4 344 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 WDR53Q7Z5U6 358 aaPredicted RBP12.42□□□□□ -0.42
CTNS-201ENST00000046640 NUDT13Q86X67 352 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 TBC1D3Q8IZP1 549 aaPredicted RBP12.42□□□□□ -0.42
CTNS-201ENST00000046640 OR4D11Q8NGI4 311 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 GPR151Q8TDV0 419 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 DOK4Q8TEW6 326 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 CAMK1GQ96NX5 476 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 PBX4Q9BYU1 374 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 SERHL2Q9H4I8 314 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 SYNPO2LQ9H987 977 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 SPHK1Q9NYA1 384 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 POFUT2Q9Y2G5 429 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 PEX16Q9Y5Y5 336 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 ENPP4Q9Y6X5 453 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 H3BN98 237 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 M0R3H8 397 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 HMGN4O00479 90 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 PGRMC2O15173 223 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 LRRTM2O43300 516 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 ERI3O43414 337 aaKnown RBP12.42□□□□□ -0.42
CTNS-201ENST00000046640 IFNA14P01570 189 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 RPN2P04844 631 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 FHP07954 510 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 ITGA2P17301 1181 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 RPS19P39019 145 aaKnown RBP12.42□□□□□ -0.42
CTNS-201ENST00000046640 SLC15A1P46059 708 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 CLDN2P57739 230 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 RPA4Q13156 261 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 PIN1Q13526 163 aaPredicted RBP12.42□□□□□ -0.42
CTNS-201ENST00000046640 SEC23BQ15437 767 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 COMTD1Q86VU5 262 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 CCDC116Q8IYX3 515 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 FBXL6Q8N531 539 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 IL17RDQ8NFM7 739 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 OR2A1Q8NGT9 310 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 RGMAQ96B86 450 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 SDHCQ99643 169 aaPredicted RBP12.42□□□□□ -0.42
CTNS-201ENST00000046640 MMP28Q9H239 520 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 SFXN1Q9H9B4 322 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 EQTNQ9NQ60 294 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 SIRT3Q9NTG7 399 aaPredicted RBP12.42□□□□□ -0.42
CTNS-201ENST00000046640 MUTYHQ9UIF7 546 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 HCN4Q9Y3Q4 1203 aa12.42□□□□□ -0.42
CTNS-201ENST00000046640 KIF26AQ9ULI4 1882 aaPredicted RBP12.42□□□□□ -0.42
CTNS-201ENST00000046640 PRAMEF27A3QJZ7 478 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 EFCAB10A6NFE3 127 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 OR10H3O60404 316 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 ENTPD6O75354 484 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 PTTG1O95997 202 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 CXCR2P25025 360 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 BCL6P41182 706 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 NCBP2P52298 156 aaKnown RBP eCLIP12.41□□□□□ -0.42
CTNS-201ENST00000046640 CDC42P60953 191 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 CSNK2BP67870 215 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 SSX1Q16384 188 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 OR4C11Q6IEV9 310 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 IKBIPQ70UQ0 350 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 RAB7BQ96AH8 199 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 MTERF3Q96E29 417 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 MYADMQ96S97 322 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 TTYH2Q9BSA4 534 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 ASPNQ9BXN1 380 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 RHBGQ9H310 441 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 CD93Q9NPY3 652 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 ZCCHC3Q9NUD5 404 aaKnown RBP12.41□□□□□ -0.42
CTNS-201ENST00000046640 SEC14L3Q9UDX4 400 aa12.41□□□□□ -0.42
CTNS-201ENST00000046640 SNRNP200O75643 2136 aaKnown RBP12.41□□□□□ -0.42
CTNS-201ENST00000046640 EPOPA6NHQ4 379 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms