RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Unc80Q8BLN6 3261 aa17.4■□□□□ 0.38
Trim47-202ENSMUST00000106441 Vps13aQ5H8C4 3166 aa17.4■□□□□ 0.38
Trim47-202ENSMUST00000106441 Vmn2r12L7N217 831 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Hmgn1P18608 96 aaKnown RBP17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Gbx2P48031 348 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Tgm3Q08189 693 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Dusp5Q1HL35 384 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Coq8bQ566J8 533 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Pced1aQ6P1Z5 449 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Slc7a6Q8BGK6 515 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Kiaa1671Q8BRV5 308 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 AntxrlQ8BVM2 641 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 CcsapQ8QZT2 252 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 RbksQ8R1Q9 323 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Vmn1r81Q8R286 306 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Grip1Q925T6 1127 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Atp5dQ9D3D9 168 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Spata19Q9DAQ9 154 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 DstnQ9R0P5 165 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Adam26aQ9R158 697 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Zbtb34A2ATY4 518 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Gm8926L7MUE8 181 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Kpna3O35344 521 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Zp3P10761 424 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Phxr1P15973 60 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Rps13P62301 151 aaKnown RBP17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Olfr681Q3SXH8 315 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Cpxcr1Q3V0P1 322 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Tmub2Q3V209 319 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Slc26a10Q5EBI0 492 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Gpalpp1Q69ZC8 346 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Olfr1318Q7TQW6 320 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Fbxl4Q8BH70 621 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Kcnk10Q8BUW1 535 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Larp4Q8BWW4 719 aaKnown RBP17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Prokr2Q8K458 381 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Cops8Q8VBV7 209 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Olfr1317Q8VF84 316 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Olfr679Q8VGV0 315 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Rpp25Q91WE3 199 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Spred1Q924S8 444 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Lims1Q99JW4 325 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Smurf1Q9CUN6 731 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Pfdn1Q9CWM4 122 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 1700069L16RikQ9D9H5 109 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Tlr4Q9QUK6 835 aa17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Chd7A2AJK6 2986 aaKnown RBP17.39■□□□□ 0.37
Trim47-202ENSMUST00000106441 Esp31A8R0W3 114 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Gm8180E9PXN0 145 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Vmn2r56E9Q4U5 779 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Opn1mwO35599 359 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Alx3O70137 343 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 F2rl3O88634 396 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 ThP24529 498 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 IduaP48441 634 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Cds1P98191 461 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Malt1Q2TBA3 832 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 P2rx5Q3UYI1 455 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 C1orf109Q499E6 217 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Gm11492Q5ND19 536 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Gm2aQ60648 193 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Sim1Q61045 765 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Cdk6Q64261 326 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Olig3Q6PFG8 273 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Tas2r38Q7TQA6 331 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Ccdc126Q8BIS8 140 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Use1Q9CQ56 270 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Gtf2e2Q9D902 292 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Slc5a3Q9JKZ2 718 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Znf207Q9JMD0 495 aaKnown RBP17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Slfn3A0A1L1STQ7 640 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Tex13aA2AFS9 377 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Gm14744B1AVU4 173 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Lrr1D3YY91 422 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Catsperg1E9Q355 1151 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Smim18J3QNP2 93 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Olfr694K7N641 315 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 OsmrO70458 971 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 H2-D1P14427 368 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Ptger4P32240 513 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Nat3P50296 290 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 AbatP61922 500 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Kcna7Q17ST2 489 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Olfr128Q7TRJ1 308 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Slitrk5Q810B7 957 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Nipal3Q8BGN5 410 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Cfap20Q8BTU1 193 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 TtpaQ8BWP5 278 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Mblac1Q8BWY4 260 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Fam110bQ8C739 366 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 5430402E10RikQ9D3N5 173 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Ankrd7Q9D504 279 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Tsga8Q9JJL0 238 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Tpk1Q9R0M5 243 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Scnn1gQ9WU39 655 aa17.38■□□□□ 0.37
Trim47-202ENSMUST00000106441 Plxna2P70207 1894 aa17.37■□□□□ 0.37
Trim47-202ENSMUST00000106441 Trmt1lA2RSY6 728 aaKnown RBP17.37■□□□□ 0.37
Trim47-202ENSMUST00000106441 Ccdc7bE9Q9Y3 381 aa17.37■□□□□ 0.37
Trim47-202ENSMUST00000106441 TspearJ3S6Y1 670 aa17.37■□□□□ 0.37
Trim47-202ENSMUST00000106441 DdostO54734 441 aa17.37■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 57.9 ms