RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Use1Q9CQ56 270 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Lrrc69Q9D9Q0 347 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Ninj2Q9JL89 143 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Igkv6-25A0A140T8N7 115 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Olfr671A0A1B0GSN5 317 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Gm30302A0A1Y7VN40 1110 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Olfr1306A2BFL7 312 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Vmn1r177E9PXM3 309 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Gm6811E9Q3Y8 510 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Vmn1r31L7N2F1 303 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 TpmtO55060 240 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Ccnd1P25322 295 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Id2P41136 134 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Tbx6P70327 436 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 C1orf109Q499E6 217 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Prrg3Q6PAQ9 231 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Rbm11Q80YT9 238 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Mup21Q80YX8 181 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Krt75Q8BGZ7 551 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Sephs1Q8BH69 392 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Gbp9Q8BTS3 619 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Hat1Q8BY71 416 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Ttc23Q8CHY7 488 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Olfr352Q8VGJ9 315 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 EtfaQ99LC5 333 aaKnown RBP21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Mfsd2aQ9DA75 534 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Emc7Q9EP72 241 aa21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Ak4Q9WUR9 223 aaKnown RBP21.4■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Kif28pD3YXS5 1028 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 1700122O11RikJ3QPW6 241 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Gm8926L7MUE8 181 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Hipk1O88904 1210 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 RpsaP14206 295 aaKnown RBP21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Gabrg3P27681 467 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 CntfP51642 198 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Limk1P53668 647 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Slc9a3r1P70441 355 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Epha4Q03137 986 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 SctQ08535 133 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 MedagQ14BA6 303 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Gm1123Q1RME4 390 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Nxf3Q4ZGD9 553 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 ZpbpQ62522 350 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Olfr792Q7TRH9 311 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Catsper3Q80W99 395 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Pgs1Q8BHF7 553 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 GmppbQ8BTZ7 360 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Q8K207 121 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Mmp21Q8K3F2 568 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Vmn1r69Q8VIC1 319 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Zfp810Q99K45 461 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 4921530L21RikQ9CQ47 274 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Pex13Q9D0K1 405 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Cib4Q9D9N5 185 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Stpg4Q9DAG5 247 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Rhox9Q9EQM5 227 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Phc2Q9QWH1 850 aa21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Fads2Q9Z0R9 444 aaKnown RBP21.39■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Pkd2l1A2A259 760 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Tmem233D3Z1U7 110 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Sema6aO35464 1031 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Pmm1O35621 262 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Rplp0P14869 317 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Olfr616Q3KPB0 317 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Trp53i11Q4QQM4 189 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 UnklQ5FWH2 727 aaKnown RBP21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Xrcc1Q60596 631 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Lrrc75bQ7TPD7 306 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Olfr295Q7TS08 309 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Znf592Q8BHZ4 1262 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Egln2Q91YE2 419 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Cd209eQ91ZW7 208 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Lypd6bQ9D7F2 191 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Htr3bQ9JHJ5 437 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Kcnj10Q9JM63 379 aa21.38■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Vmn2r50E9PW61 861 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Pole2O54956 527 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Rdh5O55240 318 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 CryabP23927 175 aaKnown RBP21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 TtlP38585 377 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Plin2P43883 425 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 OcmP51879 109 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 ApodP51910 189 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 NadkP58058 439 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Kcnab1P63143 401 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 H2-Eb2Q3UUV9 287 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Eif1aQ60872 144 aaKnown RBP21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Hsfy2Q80Y37 392 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Fbxl4Q8BH70 621 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 NapepldQ8BH82 396 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Eri3Q8C460 337 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Rbm4Q8C7Q4 361 aaKnown RBP21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Il23rQ8K4B4 644 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 SdslQ8R238 329 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 NrmQ8VC65 262 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Rbm4bQ8VE92 357 aaKnown RBP21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Olfr103Q920Y8 313 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Acy1Q99JW2 408 aa21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Idh3aQ9D6R2 366 aaKnown RBP21.37■■□□□ 1.01
Scn1b-201ENSMUST00000098548 Cpne6Q9Z140 557 aa21.37■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms