RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 GhrhrP32082 423 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Hsd11b2P51661 386 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Entpd1P55772 510 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 ActbP60710 375 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Actg1P63260 375 aaKnown RBP11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cyb5r2Q3KNK3 276 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rnf26Q8BUH7 424 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gpn2Q8VEJ1 310 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr1099Q8VG37 312 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Elp5Q99L85 300 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Col25a1Q99MQ5 666 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Q9CWU4 180 aaKnown RBP11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Acot12Q9DBK0 556 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr613E9PYB4 317 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 OgdhlE9Q7L0 1029 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 HexaP29416 528 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 4933415F23RikQ14BX6 153 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Lrrtm2Q8BGA3 515 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 RhebQ921J2 184 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Phf19Q9CXG9 578 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Bco1Q9JJS6 566 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Sema6cQ9WTM3 931 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Kif13bA0A286YCV9 1847 aa11.47□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr1156A2AVC3 323 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr1215A3KGY3 312 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Btnl2O70355 454 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 CtsdP18242 410 aaKnown RBP11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Znf583Q3V080 568 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tas2r3Q7TQA7 316 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Bcas3Q8CCN5 928 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tspan10Q8VCF5 331 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr998Q8VF76 314 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Elmod3Q91YP6 381 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gdpd3Q99LY2 330 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slc38a3Q9DCP2 505 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Insl5Q9WUG6 135 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm12790B1AUV6 201 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Commd6Q3V4B5 87 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Znf354cQ571J5 560 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Serpinf2Q61247 491 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Brix1Q9DCA5 353 aaKnown RBP11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Klhdc7bA0A286YD60 1263 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Fibcd1A2AV25 459 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm21904A8HG57 180 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm21866J3QMH4 180 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 PrkcaP20444 672 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ptger1P35375 405 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Prox2Q8BII1 593 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Fam3aQ9D8T0 230 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr710Q9EP55 310 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 NktrP30415 1453 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm3676D3Z236 184 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm3573L7N292 184 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Mtx2O88441 263 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ptger3P30557 365 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 E330014E10RikQ3UL33 481 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cdk15Q3V3A1 433 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 D5Ertd577eQ499F0 481 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Sh3rf2Q8BZT2 735 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Vmn1r21Q8R2C6 297 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr622Q8VGY7 317 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Mrgpra5Q91ZC7 304 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 EedQ921E6 441 aaKnown RBP11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 1700001F09RikQ9DAR5 184 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm26992S4R1A3 76 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cntnap1O54991 1385 aa11.46□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm4181E9Q7X3 184 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Hsf1P38532 525 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Hcrtr2P58308 460 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Zfp120Q8BZW4 436 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Creb3l4Q9D2A5 370 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 S100a16Q9D708 124 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slamf1Q9QUM4 343 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 March7Q9WV66 693 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 B3galt1O54904 326 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Bpifa1P97361 278 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 BC061237Q6P8I2 184 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Prrt3Q6PE13 971 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Prps1l1Q8C5R8 318 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vmn1r229Q8R2A9 306 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vstm5Q9D806 199 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Nat3P50296 290 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cd37Q61470 281 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr290Q7TS13 315 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Arhgap19Q8BRH3 494 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm5591Q8CDK1 855 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mchr1Q8JZL2 353 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Kcnc4Q8R1C0 628 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Etv3Q8R4Z4 513 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Usb1Q91W78 267 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cdca3Q99M54 266 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Upk3bl1Q9D701 249 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cited4Q9WUL8 182 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1153A2AVC0 318 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Scgb1b30A2BH64 92 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm4775F7ANJ3 135 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Bloc1s1O55102 125 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Bdkrb1Q61125 334 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1472Q7TQQ9 314 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1198Q7TR12 308 aa11.46□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms