RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Desi1Q9CQT7 168 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Khdrbs2Q9WU01 349 aa9.51□□□□□ -0.89
Ldlr-201ENSMUST00000034713 SktA2AQ25 1946 aaKnown RBP9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr1366A0A1W2P740 328 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gm15155B1B034 138 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Daw1D3Z7A5 415 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 5730507C01RikJ3QPX0 416 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Vmn2r52L7N2B2 852 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Pim1P06803 397 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Sbk3P0C5K0 361 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 BdnfP21237 249 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Cd9P40240 226 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Defb25Q30KN8 71 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Ccbe1Q3MI99 408 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 EnkurQ6SP97 255 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Fgl1Q71KU9 314 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Casd1Q7TN73 797 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Fbxl4Q8BH70 621 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Dnajc27Q8CFP6 273 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Steap3Q8CI59 488 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Mrpl48Q8JZS9 211 aaKnown RBP9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Zfp810Q99K45 461 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Mrps18aQ99N85 196 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Med31Q9CXU1 131 aaKnown RBP9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 4933436I01RikQ9D3T1 429 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Rrp8Q9DB85 457 aaKnown RBP9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Trpv4Q9EPK8 871 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 B3galt5Q9JI67 308 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Plag1Q9QYE0 499 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gm5538W4VSP6 401 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Crisp4E9PVG4 293 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gm7951E9Q0A2 213 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr549E9Q542 316 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gm6482F6YHC1 213 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gm17124F6ZIG1 213 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Prl4a1O35256 227 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Tcf3P15806 651 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Tcea3P23881 347 aaKnown RBP9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 CryaaP24622 196 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Mat2aQ3THS6 395 aaKnown RBP9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Ms4a15Q3UPL6 245 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 MertkQ60805 994 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Nr0b2Q62227 260 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Pwwp2aQ69Z61 730 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Polr2mQ6P6I6 366 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr1085Q7TR64 313 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Clrn3Q8BHH8 226 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 IlvblQ8BU33 632 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Zc2hc1cQ8CCG1 527 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Dcun1d3Q8K0V2 304 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Acot7Q91V12 381 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Thumpd1Q99J36 350 aaKnown RBP9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Akirin1Q99LF1 191 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Rwdd2bQ99M03 290 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Fam69aQ9D6I7 428 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Sgk2Q9QZS5 367 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Nfkb2Q9WTK5 899 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gm266A6H634 200 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Vmn1r176G3UW31 304 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr738L7N1X7 311 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Rgs7O54829 469 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Ighg1P01869 393 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Tspan5P62080 268 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 OxtrP97926 388 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Emx1Q04742 257 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr1418Q7TQS3 318 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Sult1c1Q80VR3 304 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Slc15a3Q8BPX9 578 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Colec10Q8CF98 277 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gatad2aQ8CHY6 629 aaKnown RBP9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Cnppd1Q8K158 407 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Sdr9c7Q8K3P0 313 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Rnf121Q8R1Z9 327 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Usp3Q91W36 520 aaKnown RBP9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Rbm18Q9CR83 190 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Sp2Q9D2H6 612 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Fam3bQ9D309 235 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Jph3Q9ET77 744 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Bmp10Q9R229 421 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Scnn1gQ9WU39 655 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 SncgQ9Z0F7 123 aaKnown RBP9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 FAM186AQ9D9R9 1790 aa9.5□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Nhsl2B1AXH1 854 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Esp34G3UXG0 151 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Rnpepl1G5E872 720 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Sap18O55128 153 aaKnown RBP9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Ccl5P30882 91 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Apoc3P33622 99 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gdf5P43027 495 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Q3U7U4 132 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 HepacamQ640R3 418 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Muc19Q6JHY2 733 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Ube2j2Q6P073 259 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Pced1bQ8BGX1 433 aaKnown RBP9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 MepceQ8K3A9 666 aaKnown RBP9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Pcolce2Q8R4W6 414 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Itgbl1Q8VDV0 494 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr692Q8VF03 329 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Vmn1r69Q8VIC1 319 aa9.49□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Plekhj1Q9D240 164 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms