RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 NDUFA9Q16795 377 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 PMS2CLQ68D20 193 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 PRSS41Q7RTY9 318 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 CYGBQ8WWM9 190 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 RASSF5Q8WWW0 418 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 GEMIN6Q8WXD5 167 aaKnown RBP15.47■□□□□ 0.07
PHGDH-216ENST00000641375 NRBF2Q96F24 287 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 AHCYL2Q96HN2 611 aaKnown RBP15.47■□□□□ 0.07
PHGDH-216ENST00000641375 TGM7Q96PF1 710 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 ZNF347Q96SE7 839 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 ZNF607Q96SK3 696 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 ELF4Q99607 663 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-216ENST00000641375 SERHL2Q9H4I8 314 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 REEP1Q9H902 201 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 STARD5Q9NSY2 213 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 TRPC4Q9UBN4 977 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 SUSD2Q9UGT4 822 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 MAGED1Q9Y5V3 778 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-216ENST00000641375 RNF215Q9Y6U7 377 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 LAMA1P25391 3075 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 CACNA1EQ15878 2313 aa15.47■□□□□ 0.07
PHGDH-216ENST00000641375 ATP6V1G1O75348 118 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 SNAP29O95721 258 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 HMGN2P05204 90 aaKnown RBP15.46■□□□□ 0.07
PHGDH-216ENST00000641375 OR12D1P0DN82 309 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 THRBP10828 461 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 MYF6P23409 242 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 MC3RP41968 323 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 MLLT3P42568 568 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-216ENST00000641375 SIM1P81133 766 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-216ENST00000641375 PRTGQ2VWP7 1150 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 ST13P4Q8IZP2 240 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-216ENST00000641375 CARFQ8N187 725 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 SLC25A45Q8N413 288 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 XAGE5Q8WWM1 108 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 TANKQ92844 425 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 RUBCNLQ9H714 662 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 PDE7BQ9NP56 450 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 THSD1Q9NS62 852 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 PLCL2Q9UPR0 1127 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 CLCA2Q9UQC9 943 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 SDK1Q7Z5N4 2213 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 A0A1W2PS29 197 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 TDGF1P13385 188 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 GLB1P16278 677 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 FPR1P21462 350 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 GPR3P46089 330 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 BNIP3Q12983 259 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 GK3PQ14409 553 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 LASP1Q14847 261 aaKnown RBP15.46■□□□□ 0.07
PHGDH-216ENST00000641375 RFX4Q33E94 735 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 IQCCQ4KMZ1 466 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 TMEM179BQ7Z7N9 219 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 SLC44A2Q8IWA5 706 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-216ENST00000641375 CA13Q8N1Q1 262 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 ARHGEF39Q8N4T4 335 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 NUP43Q8NFH3 380 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 PNPLA3Q9NST1 481 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 C3orf18Q9UK00 162 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 ORC6Q9Y5N6 252 aa15.46■□□□□ 0.07
PHGDH-216ENST00000641375 TNRC6BQ9UPQ9 1833 aaKnown RBP15.46■□□□□ 0.06
PHGDH-216ENST00000641375 VCANP13611 3396 aa15.46■□□□□ 0.06
PHGDH-216ENST00000641375 CCDC88CQ9P219 2028 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 CYR61O00622 381 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 ADAMDEC1O15204 470 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 ASNA1O43681 348 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 SLC28A2O43868 658 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 DNAJB6O75190 326 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 SERPINB7O75635 380 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 ZBTB11O95625 1053 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-216ENST00000641375 NR2F1P10589 423 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 CPMP14384 443 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 PORP16435 677 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-216ENST00000641375 CRISP3P54108 245 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 GFERP55789 205 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 RAB38P57729 211 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 TCTE1Q5JU00 501 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 TTC29Q8NA56 475 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-216ENST00000641375 OR5D16Q8NGK9 328 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 GAB3Q8WWW8 586 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 COL26A1Q96A83 441 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 ZNF285Q96NJ3 590 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 SLX1AQ9BQ83 275 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 GABARAPL1Q9H0R8 117 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 SOHLH2Q9NX45 425 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 NTMQ9P121 344 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 SAMHD1Q9Y3Z3 626 aaKnown RBP15.45■□□□□ 0.06
PHGDH-216ENST00000641375 SGK494L7N484 410 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 PLOD2O00469 737 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 SLITRK5O94991 958 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 SHC2P98077 582 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 MYBPC1Q00872 1141 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 PPP1R8Q12972 351 aaKnown RBP15.45■□□□□ 0.06
PHGDH-216ENST00000641375 FAM53BQ14153 422 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 GARNL3Q5VVW2 1013 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 KRT73Q86Y46 540 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 HS3ST5Q8IZT8 346 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 LGI4Q8N135 537 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 OR5T3Q8NGG3 340 aa15.45■□□□□ 0.06
PHGDH-216ENST00000641375 EPYCQ99645 322 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms