RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 ANKRD53Q8N9V6 530 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 OR5T3Q8NGG3 340 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 WDR60Q8WVS4 1066 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 NXNL1Q96CM4 212 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 SORT1Q99523 831 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 CCDC28BQ9BUN5 200 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 TRIM54Q9BYV2 358 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 DERL2Q9GZP9 239 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 AICDAQ9GZX7 198 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 NMRK1Q9NWW6 199 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.79□□□□□ -0.36
HLA-C-210ENST00000640219 HRNRQ86YZ3 2850 aaPredicted RBP12.78□□□□□ -0.36
HLA-C-210ENST00000640219 LRRC14BA6NHZ5 514 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 G3V2L1 256 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 UBXN8O00124 270 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 NDUFS4O43181 175 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 CCNT2O60583 730 aaKnown RBP12.78□□□□□ -0.36
HLA-C-210ENST00000640219 ATE1O95260 518 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 ANPEPP15144 967 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 TFEBP19484 476 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 SERPINB5P36952 375 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 SLC6A12P48065 614 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 AGTR2P50052 363 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 CCR8P51685 355 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 RPS15AP62244 130 aaKnown RBP12.78□□□□□ -0.36
HLA-C-210ENST00000640219 CUL3Q13618 768 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 ADAMTSL2Q86TH1 951 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 ASPGQ86U10 573 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 CENPLQ8N0S6 344 aaPredicted RBP12.78□□□□□ -0.36
HLA-C-210ENST00000640219 SLC5A8Q8N695 610 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 POGLUT1Q8NBL1 392 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 MFSD9Q8NBP5 474 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 OR10Q1Q8NGQ4 319 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 OR6Y1Q8NGX8 325 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 M1APQ8TC57 530 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 CCDC126Q96EE4 140 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 TSPAN17Q96FV3 270 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 FAR2Q96K12 515 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 SLC6A16Q9GZN6 736 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 VN1R1Q9GZP7 353 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 DRC3Q9H069 523 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 KLHL31Q9H511 634 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 POPDC3Q9HBV1 291 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 NEUROD4Q9HD90 331 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 WWOXQ9NZC7 414 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 C19orf25Q9UFG5 118 aaPredicted RBP12.78□□□□□ -0.36
HLA-C-210ENST00000640219 SCOCQ9UIL1 159 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 DYRK1BQ9Y463 629 aa12.78□□□□□ -0.36
HLA-C-210ENST00000640219 A0A0G2JN53 185 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 TRPC5OSA6NMA1 111 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 A6NNC1 897 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 SUPT3HB4E1H0 165 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 HDAC3O15379 428 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 HS6ST1O60243 411 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 NPHS1O60500 1241 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 SUPT3HO75486 399 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 CDC123O75794 336 aaPredicted RBP12.77□□□□□ -0.37
HLA-C-210ENST00000640219 COX4I1P13073 169 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 REEP5Q00765 189 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 KLF10Q13118 480 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 RBBP5Q15291 538 aaKnown RBP12.77□□□□□ -0.37
HLA-C-210ENST00000640219 EXT1Q16394 746 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 GSTA3Q16772 222 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 EMC4Q5J8M3 183 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 MFSD4BQ5TF39 518 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 TMEM214Q6NUQ4 689 aaKnown RBP12.77□□□□□ -0.37
HLA-C-210ENST00000640219 KLC3Q6P597 504 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 GPSM1Q86YR5 675 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 PLD6Q8N2A8 252 aaKnown RBP12.77□□□□□ -0.37
HLA-C-210ENST00000640219 ABHD11Q8NFV4 315 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 OR5M3Q8NGP4 307 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 ACTRT2Q8TDY3 377 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 SLC13A3Q8WWT9 602 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 TM4SF19Q96DZ7 209 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 UBXN10Q96LJ8 280 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 HAUS8Q9BT25 410 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 GATA5Q9BWX5 397 aaPredicted RBP12.77□□□□□ -0.37
HLA-C-210ENST00000640219 PCBD2Q9H0N5 130 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 TCF7L2Q9NQB0 619 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 CD274Q9NZQ7 290 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 CRIM1Q9NZV1 1036 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 SLC7A8Q9UHI5 535 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 RNF112Q9ULX5 631 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 PRPF19Q9UMS4 504 aaKnown RBP12.77□□□□□ -0.37
HLA-C-210ENST00000640219 ATRQ13535 2644 aa12.77□□□□□ -0.37
HLA-C-210ENST00000640219 A0A088AWK7 358 aa12.76□□□□□ -0.37
HLA-C-210ENST00000640219 MAGEA13PA6NCF6 341 aa12.76□□□□□ -0.37
HLA-C-210ENST00000640219 ZNF195O14628 629 aa12.76□□□□□ -0.37
HLA-C-210ENST00000640219 SH3BGRLO75368 114 aa12.76□□□□□ -0.37
HLA-C-210ENST00000640219 SMNDC1O75940 238 aaKnown RBP eCLIP12.76□□□□□ -0.37
HLA-C-210ENST00000640219 PDE9AO76083 593 aa12.76□□□□□ -0.37
HLA-C-210ENST00000640219 ZNF888P0CJ79 500 aaPredicted RBP12.76□□□□□ -0.37
HLA-C-210ENST00000640219 EPORP19235 508 aa12.76□□□□□ -0.37
HLA-C-210ENST00000640219 CD22P20273 847 aa12.76□□□□□ -0.37
HLA-C-210ENST00000640219 RFC3P40938 356 aa12.76□□□□□ -0.37
HLA-C-210ENST00000640219 ZFP36L2P47974 494 aaKnown RBP12.76□□□□□ -0.37
HLA-C-210ENST00000640219 TAS2R50P59544 299 aa12.76□□□□□ -0.37
HLA-C-210ENST00000640219 RAB8AP61006 207 aa12.76□□□□□ -0.37
HLA-C-210ENST00000640219 PPP2R2BQ00005 443 aa12.76□□□□□ -0.37
HLA-C-210ENST00000640219 SLC25A3Q00325 362 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms