RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 LOC100130705A0A1B0GUX0 176 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 OR52A4PA6NMU1 304 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 TNFRSF10CO14798 259 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 FOXD2O60548 495 aaPredicted RBP10.5□□□□□ -0.73
SCN1B-208ENST00000640135 ZNF28P17035 718 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 MAGP20916 626 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 IVDP26440 423 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 OLFML2AQ68BL7 652 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 TMEFF1Q8IYR6 380 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 ZNF101Q8IZC7 436 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 GPR137CQ8N3F9 429 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 OR52B6Q8NGF0 335 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 THAP3Q8WTV1 239 aaPredicted RBP10.5□□□□□ -0.73
SCN1B-208ENST00000640135 SLC45A3Q96JT2 553 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 PTRH2Q9Y3E5 179 aaKnown RBP10.5□□□□□ -0.73
SCN1B-208ENST00000640135 TOGARAM1Q9Y4F4 1720 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 MYH6P13533 1939 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 C2orf92A0A1B0GVN3 265 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 TEX46H3BTG2 121 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 ERCC1P07992 297 aaPredicted RBP10.5□□□□□ -0.73
SCN1B-208ENST00000640135 TRAM1Q15629 374 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 CES4AQ5XG92 561 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 RTN4RL1Q86UN2 441 aaPredicted RBP10.5□□□□□ -0.73
SCN1B-208ENST00000640135 STON2Q8WXE9 905 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 ECHDC3Q96DC8 303 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 NTMT1Q9BV86 223 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 MAGIXQ9H6Y5 334 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 ZNF395Q9H8N7 513 aaPredicted RBP10.5□□□□□ -0.73
SCN1B-208ENST00000640135 EBF2Q9HAK2 575 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 NANSQ9NR45 359 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 MEMO1Q9Y316 297 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 A0A0X1KG70 313 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 GXYLT2A0PJZ3 443 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 UNC119BA6NIH7 251 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 RTCAO00442 366 aaKnown RBP10.5□□□□□ -0.73
SCN1B-208ENST00000640135 PHYHO14832 338 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 SLC22A1O15245 554 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 ABCB7O75027 752 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 KCNK5O95279 499 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 ADORA3P0DMS8 318 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 C7P10643 843 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 CLUP10909 449 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 AOAHP28039 575 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 SEC23BQ15437 767 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 TMEM52BQ4KMG9 183 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 DCAF12Q5T6F0 453 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 ARHGAP11AQ6P4F7 1023 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 OPN5Q6U736 354 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.5□□□□□ -0.73
SCN1B-208ENST00000640135 TEX26Q8N6G2 289 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 ZNF283Q8N7M2 679 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 TIMMDC1Q9NPL8 285 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 MBD2Q9UBB5 411 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 EIF3KQ9UBQ5 218 aaKnown RBP10.5□□□□□ -0.73
SCN1B-208ENST00000640135 PTBP2Q9UKA9 531 aaKnown RBP10.5□□□□□ -0.73
SCN1B-208ENST00000640135 N4BP2Q86UW6 1770 aaPredicted RBP10.5□□□□□ -0.73
SCN1B-208ENST00000640135 FAM25EA8MYX2 175 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 FAM227AF5H4B4 570 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 OR2T1O43869 369 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 UBL4AP11441 157 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 UBE2NP61088 152 aaKnown RBP10.5□□□□□ -0.73
SCN1B-208ENST00000640135 BLMHQ13867 455 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 TYSND1Q2T9J0 566 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 NADSYN1Q6IA69 706 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 CNTN4Q8IWV2 1026 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 SETD6Q8TBK2 473 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 TBX5Q99593 518 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 BRD7Q9NPI1 651 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 BTNL2Q9UIR0 455 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 ZNF222Q9UK12 451 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 DNAJC15Q9Y5T4 150 aa10.5□□□□□ -0.73
SCN1B-208ENST00000640135 SLC9B1P1A6NJY1 282 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.49□□□□□ -0.73
SCN1B-208ENST00000640135 LATO43561 262 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 CKMT2P17540 419 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 PRDX1Q06830 199 aaKnown RBP10.49□□□□□ -0.73
SCN1B-208ENST00000640135 MALLQ13021 153 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 CHAF1BQ13112 559 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 TUBA3CQ13748 450 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 MFSD2AQ8NA29 543 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 OR2L8Q8NGY9 312 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 OR14L1PQ8NHC6 308 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 TNFAIP8L1Q8WVP5 186 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 NSMAFQ92636 917 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 MAP3K3Q99759 626 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 TUBA8Q9NY65 449 aaPredicted RBP10.49□□□□□ -0.73
SCN1B-208ENST00000640135 CLEC4AQ9UMR7 237 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 SLC7A11Q9UPY5 501 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 RFXAPO00287 272 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 ITGA5P08648 1049 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 PNMTP11086 282 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 SRFP11831 508 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 DDCP20711 480 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 PERM1Q5SV97 790 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 VWA5B2Q8N398 1253 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 PARP8Q8N3A8 854 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 DNAJA4Q8WW22 397 aaPredicted RBP10.49□□□□□ -0.73
SCN1B-208ENST00000640135 NT5C3BQ969T7 300 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 TMEM80Q96HE8 168 aa10.49□□□□□ -0.73
SCN1B-208ENST00000640135 MROQ9BYG7 248 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms