RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 PRPF18Q99633 342 aaKnown RBP18.1■□□□□ 0.49
HLA-A-209ENST00000638375 ING2Q9H160 280 aa18.1■□□□□ 0.49
HLA-A-209ENST00000638375 ATP13A2Q9NQ11 1180 aa18.1■□□□□ 0.49
HLA-A-209ENST00000638375 ATAD3AQ9NVI7 634 aa18.1■□□□□ 0.49
HLA-A-209ENST00000638375 ZNF223Q9UK11 482 aaPredicted RBP18.1■□□□□ 0.49
HLA-A-209ENST00000638375 SCN2BO60939 215 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 DNAJB5O75953 348 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 CLPSP04118 112 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 IGKV3-11P04433 115 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 CD1EP15812 388 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 DDX5P17844 614 aaKnown RBP18.09■□□□□ 0.49
HLA-A-209ENST00000638375 MPIP34949 423 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 KIR3DL1P43629 444 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 MRPS35P82673 323 aaKnown RBP18.09■□□□□ 0.49
HLA-A-209ENST00000638375 SRSF11Q05519 484 aaKnown RBP18.09■□□□□ 0.49
HLA-A-209ENST00000638375 ZNF267Q14586 743 aaPredicted RBP18.09■□□□□ 0.49
HLA-A-209ENST00000638375 DPY19L1Q2PZI1 675 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 FAM174BQ3ZCQ3 159 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 ZNF551Q7Z340 670 aaPredicted RBP18.09■□□□□ 0.49
HLA-A-209ENST00000638375 PIGWQ7Z7B1 504 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 FUNDC1Q8IVP5 155 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 APLFQ8IW19 511 aaPredicted RBP18.09■□□□□ 0.49
HLA-A-209ENST00000638375 KIF2BQ8N4N8 673 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 GLB1L3Q8NCI6 653 aaPredicted RBP18.09■□□□□ 0.49
HLA-A-209ENST00000638375 OR8J2Q8NGG1 315 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 M1APQ8TC57 530 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 ZNF675Q8TD23 568 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 ZNF721Q8TF20 911 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 CTHRC1Q96CG8 243 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 ZBED6CLQ96FA7 236 aaPredicted RBP18.09■□□□□ 0.49
HLA-A-209ENST00000638375 SENP5Q96HI0 755 aaPredicted RBP18.09■□□□□ 0.49
HLA-A-209ENST00000638375 FBXL20Q96IG2 436 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 ZBTB18Q99592 522 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 CNPPD1Q9BV87 410 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 OR8D2Q9GZM6 311 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 MMP25Q9NPA2 562 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 ACSS1Q9NUB1 689 aaPredicted RBP18.09■□□□□ 0.49
HLA-A-209ENST00000638375 ERVK-19Q9WJR5 959 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 CFAP47Q6ZTR5 3102 aa18.09■□□□□ 0.49
HLA-A-209ENST00000638375 SERPINA7P05543 415 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 ITGAMP11215 1152 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 S1PR1P21453 382 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 DGKQP52824 942 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 IRX1P78414 480 aaPredicted RBP18.08■□□□□ 0.48
HLA-A-209ENST00000638375 FUT7Q11130 342 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 MAP4K2Q12851 820 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 AIMP2Q13155 320 aaKnown RBP18.08■□□□□ 0.48
HLA-A-209ENST00000638375 TBR1Q16650 682 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 COL28A1Q2UY09 1125 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 CPSF7Q8N684 471 aaKnown RBP18.08■□□□□ 0.48
HLA-A-209ENST00000638375 NATD1Q8N6N6 113 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 CLEC1AQ8NC01 280 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 SIMC1Q8NDZ2 872 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 OR1N1Q8NGS0 311 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 ELP5Q8TE02 316 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 KAT2AQ92830 837 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 CCT8L2Q96SF2 557 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 NUDT9Q9BW91 350 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 SEMA4CQ9C0C4 833 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 ZNF639Q9UID6 485 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 CROCCQ5TZA2 2017 aa18.08■□□□□ 0.48
HLA-A-209ENST00000638375 A0A1W2PRB8 838 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 FAM234BA2RU67 622 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 DYRK3O43781 588 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 C6orf47O95873 294 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 ICAM2P13598 275 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 SSTR4P31391 388 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 S100A3P33764 101 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 POLR2JP52435 117 aaKnown RBP18.07■□□□□ 0.48
HLA-A-209ENST00000638375 MANFP55145 182 aaKnown RBP18.07■□□□□ 0.48
HLA-A-209ENST00000638375 SOX8P57073 446 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 HSPB3Q12988 150 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 DUSP8Q13202 625 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 MLC1Q15049 377 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 TRMT12Q53H54 448 aaKnown RBP18.07■□□□□ 0.48
HLA-A-209ENST00000638375 KBTBD2Q8IY47 623 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 CLECL1Q8IZS7 167 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 VWA5B2Q8N398 1253 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 GALNT16Q8N428 558 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 OR7G2Q8NG99 324 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 ZFP28Q8NHY6 868 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 APOBEC4Q8WW27 367 aaKnown RBP18.07■□□□□ 0.48
HLA-A-209ENST00000638375 VMP1Q96GC9 406 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 THOC3Q96J01 351 aaKnown RBP18.07■□□□□ 0.48
HLA-A-209ENST00000638375 ART5Q96L15 291 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 ANKRA2Q9H9E1 313 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 SAR1AQ9NR31 198 aa18.07■□□□□ 0.48
HLA-A-209ENST00000638375 MED13Q9UHV7 2174 aa18.06■□□□□ 0.48
HLA-A-209ENST00000638375 TRBV11-1A0A0K0K1C0 115 aa18.06■□□□□ 0.48
HLA-A-209ENST00000638375 RNASET2O00584 256 aaKnown RBP18.06■□□□□ 0.48
HLA-A-209ENST00000638375 PRKNO60260 465 aaPredicted RBP18.06■□□□□ 0.48
HLA-A-209ENST00000638375 CBX7O95931 251 aa18.06■□□□□ 0.48
HLA-A-209ENST00000638375 PGRP06401 933 aa18.06■□□□□ 0.48
HLA-A-209ENST00000638375 ITGA3P26006 1051 aa18.06■□□□□ 0.48
HLA-A-209ENST00000638375 MC3RP41968 323 aa18.06■□□□□ 0.48
HLA-A-209ENST00000638375 CDK9P50750 372 aaKnown RBP18.06■□□□□ 0.48
HLA-A-209ENST00000638375 CCL11P51671 97 aa18.06■□□□□ 0.48
HLA-A-209ENST00000638375 UBAP2LQ14157 1087 aaKnown RBP18.06■□□□□ 0.48
HLA-A-209ENST00000638375 AGKQ53H12 422 aa18.06■□□□□ 0.48
HLA-A-209ENST00000638375 FHL5Q5TD97 284 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms