RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 LCLAT1Q6UWP7 414 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 SCML4Q8N228 414 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 C2orf73Q8N5S3 287 aaPredicted RBP18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 OR56B4Q8NH76 319 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 TSSK2Q96PF2 358 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 TP63Q9H3D4 680 aaPredicted RBP18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 OXSMQ9NWU1 459 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 B3GALT1Q9Y5Z6 326 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 A6NLC8 198 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 B4GALT4O60513 344 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 RETP07949 1114 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 GGT2P36268 569 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 CDKN2BP42772 138 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 ZNF763Q0D2J5 394 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 PRAMEF18Q5VWM3 479 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 ZMAT5Q9UDW3 170 aaKnown RBP18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 LRRC32Q14392 662 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 MPPED2Q15777 294 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 ODF4Q2M2E3 257 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 HACD4Q5VWC8 232 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 ATG9BQ674R7 924 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 DPY19L2P1Q6NXN4 242 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 KCTD20Q7Z5Y7 419 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 PIGWQ7Z7B1 504 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 GPC2Q8N158 579 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 AK6Q9Y3D8 172 aaKnown RBP18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 TOX4O94842 621 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 STBD1O95210 358 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 SLBPQ14493 270 aaKnown RBP eCLIP18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 ABHD12BQ7Z5M8 362 aaPredicted RBP18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 PSD2Q9BQI7 771 aa18.58■□□□□ 0.56
CACNA1A-257ENST00000638009 A0A1W2PPM1 405 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 CNOT4O95628 575 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 PAPD5Q8NDF8 572 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 CYP2W1Q8TAV3 490 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 HSH2DQ96JZ2 352 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 ACBD6Q9BR61 282 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 CACNG6Q9BXT2 260 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 SLC6A5Q9Y345 797 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 ACOT7O00154 380 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 AK4P27144 223 aaPredicted RBP18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 FUT10Q6P4F1 479 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 ERMP1Q7Z2K6 904 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 PTPN18Q99952 460 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 RASAL1O95294 804 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 EIF4EP06730 217 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 OR9A2Q8NGT5 310 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 M1APQ8TC57 530 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 SLC2A8Q9NY64 477 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 CNTNAP1P78357 1384 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 ZNF736B4DX44 427 aaPredicted RBP18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 ECI2O75521 394 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 SLC38A1Q9H2H9 487 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 WDR26Q9H7D7 661 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 UQCRC2P22695 453 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 PPTC7Q8NI37 304 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 NFKBIDQ8NI38 313 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 HINT2Q9BX68 163 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 DNAJC27Q9NZQ0 273 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 YDJCA8MPS7 323 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 ARVCFO00192 962 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 TGFBIQ15582 683 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 TSTD2Q5T7W7 516 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 DPPA2Q7Z7J5 298 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 PLD5Q8N7P1 536 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 ARNTL2Q8WYA1 636 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 CPT1BQ92523 772 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 CNTNAP3Q9BZ76 1288 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 DDX4Q9NQI0 724 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 FAM189A1O60320 539 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 HNRNPDQ14103 355 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 ACSBG2Q5FVE4 666 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 OR6K2Q8NGY2 324 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 SMPDL3AQ92484 453 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 MAGIXQ9H6Y5 334 aa18.57■□□□□ 0.56
CACNA1A-257ENST00000638009 H7C1Q1 480 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 PDHXO00330 501 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 NUDT1P36639 197 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 RAB11AP62491 216 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 FAM162BQ5T6X4 162 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 FKBP1CQ5VVH2 108 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 NPAS3Q8IXF0 933 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 FBXO22Q8NEZ5 403 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 CD300AQ9UGN4 299 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 MRPS14O60783 128 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 SLC22A5O76082 557 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 CD97P48960 835 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 UNC5DQ6UXZ4 953 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 C12orf29Q8N999 325 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 FAM83CQ9BQN1 747 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 CERS4Q9HA82 394 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 F5P12259 2224 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 ARPC5O15511 151 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 LAG3P18627 525 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 PDCD2LQ9BRP1 358 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 A0A0G2JLW4 131 aa18.56■□□□□ 0.56
CACNA1A-257ENST00000638009 GGT3PA6NGU5 568 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms