RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 RPL3LQ92901 407 aaKnown RBP10.92□□□□□ -0.66
CLN6-217ENST00000636964 PPCDCQ96CD2 204 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 COQ8BQ96D53 544 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 SCARF2Q96GP6 870 aaPredicted RBP10.92□□□□□ -0.66
CLN6-217ENST00000636964 MAP6Q96JE9 813 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 GPR174Q9BXC1 333 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 PCBD2Q9H0N5 130 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 TCEAL2Q9H3H9 227 aaPredicted RBP10.92□□□□□ -0.66
CLN6-217ENST00000636964 TOR3AQ9H497 397 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 PELI2Q9HAT8 420 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 MRPS30Q9NP92 439 aaKnown RBP10.92□□□□□ -0.66
CLN6-217ENST00000636964 ZNF624Q9P2J8 865 aaPredicted RBP10.92□□□□□ -0.66
CLN6-217ENST00000636964 SLCO1B1Q9Y6L6 691 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 ARHGEF17Q96PE2 2063 aaPredicted RBP10.92□□□□□ -0.66
CLN6-217ENST00000636964 TAF4O00268 1085 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 SOX1O00570 391 aaPredicted RBP10.91□□□□□ -0.66
CLN6-217ENST00000636964 SEMA3DO95025 777 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 LDLRP01130 860 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 ALBP02768 609 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 HEXBP07686 556 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 POU3F3P20264 500 aaPredicted RBP10.91□□□□□ -0.66
CLN6-217ENST00000636964 PEBP1P30086 187 aaKnown RBP10.91□□□□□ -0.66
CLN6-217ENST00000636964 SERPINB1P30740 379 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 SRP54P61011 504 aaKnown RBP10.91□□□□□ -0.66
CLN6-217ENST00000636964 GALK2Q01415 458 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 EMX1Q04741 257 aaPredicted RBP10.91□□□□□ -0.66
CLN6-217ENST00000636964 CD47Q08722 323 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 ABHD18Q0P651 414 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 FAM98BQ52LJ0 330 aaKnown RBP10.91□□□□□ -0.66
CLN6-217ENST00000636964 OR2L8Q8NGY9 312 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 RHOXF1Q8NHV9 184 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 FANK1Q8TC84 345 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 LCN9Q8WX39 176 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 UCN3Q969E3 161 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 MAL2Q969L2 176 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 CCDC115Q96NT0 180 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 ZNF300Q96RE9 604 aaPredicted RBP10.91□□□□□ -0.66
CLN6-217ENST00000636964 DPH7Q9BTV6 452 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 MS4A8Q9BY19 250 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 ZNF717Q9BY31 904 aaPredicted RBP10.91□□□□□ -0.66
CLN6-217ENST00000636964 MOV10Q9HCE1 1003 aaKnown RBP10.91□□□□□ -0.66
CLN6-217ENST00000636964 BRD7Q9NPI1 651 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 AASSQ9UDR5 926 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 ACSL6Q9UKU0 697 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 VPS4AQ9UN37 437 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 PCDHB11Q9Y5F2 797 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 FAM220BPB1ANY3 271 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 UPK1BO75841 260 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 KCNK5O95279 499 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 ZNF682O95780 498 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 KIAA1024LP59773 190 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 REEP5Q00765 189 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 LRRC32Q14392 662 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 ALG11Q2TAA5 492 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 RBM48Q5RL73 367 aaKnown RBP10.91□□□□□ -0.66
CLN6-217ENST00000636964 SLX4IPQ5VYV7 408 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 FAM71E1Q6IPT2 247 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 TMPRSS9Q7Z410 1059 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 THAP5Q7Z6K1 395 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 ADGRF3Q8IZF5 1079 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 SLC47A1Q96FL8 570 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 RHNO1Q9BSD3 238 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 ING2Q9H160 280 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 RHBGQ9H310 441 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 KLHL31Q9H511 634 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 MVB12BQ9H7P6 319 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 SMURF2Q9HAU4 748 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 SLC6A20Q9NP91 592 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 MIEF1Q9NQG6 463 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 PLSCR3Q9NRY6 295 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 RAPGEFL1Q9UHV5 662 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 COL6A3P12111 3177 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 OR6C65A6NJZ3 312 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 WASHC1A8K0Z3 465 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 NDUFS2O75306 463 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 SCELO95171 688 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 IGHV4-34P06331 123 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 RAP2AP10114 183 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 ITIH1P19827 911 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 AQP1P29972 269 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 AKT2P31751 481 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 MAP2K4P45985 399 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 MAPK12P53778 367 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 TDGQ13569 410 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 Q5BKY6 102 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 FAM205BPQ63HN1 556 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 WASH2PQ6VEQ5 465 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 MSANTD1Q6ZTZ1 278 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 ASB12Q8WXK4 309 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 REXO5Q96IC2 774 aaKnown RBP10.91□□□□□ -0.66
CLN6-217ENST00000636964 FCRL4Q96PJ5 515 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 C17orf62Q9BQA9 187 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 SLC6A16Q9GZN6 736 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 DSN1Q9H410 356 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 SYNPO2LQ9H987 977 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 LMAN1LQ9HAT1 526 aa10.91□□□□□ -0.66
CLN6-217ENST00000636964 CAB39Q9Y376 341 aaPredicted RBP10.91□□□□□ -0.66
CLN6-217ENST00000636964 TDRD6O60522 2096 aaKnown RBP10.9□□□□□ -0.66
CLN6-217ENST00000636964 ERVH48-1M5A8F1 160 aa10.9□□□□□ -0.66
CLN6-217ENST00000636964 AP3D1O14617 1153 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms