RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 FTCDNL1E5RQL4 147 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 ZNF780AO75290 641 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 AGR2O95994 175 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 TNFRSF1BP20333 461 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 MRPL21Q7Z2W9 205 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 TSPAN18Q96SJ8 248 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 C7orf50Q9BRJ6 194 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 CRB3Q9BUF7 120 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 RHBDD3Q9Y3P4 386 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 CRTAPO75718 401 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 NDUFV2P19404 249 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 POU3F2P20265 443 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 MAP2K4P45985 399 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 ZNF805Q5CZA5 627 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 APCDD1Q8J025 514 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 GTF2H4Q92759 462 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 WRAP73Q9P2S5 460 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 PEX16Q9Y5Y5 336 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 SHMT2P34897 504 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 DCUN1D3Q8IWE4 304 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 TM9SF4Q92544 642 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 TMEM80Q96HE8 168 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 TMEM175Q9BSA9 504 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 TWSG1Q9GZX9 223 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 CXorf21Q9HAI6 301 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 FOLH1BQ9HBA9 442 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 H7C1Q1 480 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 CLIC3O95833 236 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 PPP1R3AQ16821 1122 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 ACSBG2Q5FVE4 666 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 CAMK1GQ96NX5 476 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 MROQ9BYG7 248 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 C2orf42Q9NWW7 574 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 CKMT2P17540 419 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 BBS1Q8NFJ9 593 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 STK35Q8TDR2 534 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 ECHDC3Q96DC8 303 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 INPP4AQ96PE3 977 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 RNF32Q9H0A6 362 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 DNAJB9Q9UBS3 223 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 NENFQ9UMX5 172 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 GPR52Q9Y2T5 361 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 RFXAPO00287 272 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 S100PP25815 95 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 ELK4P28324 431 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 ERVK-8P63133 956 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 DSC1Q08554 894 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 GBX1Q14549 363 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 SAMD12Q8N8I0 201 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 SCCPDHQ8NBX0 429 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 SLC22A4Q9H015 551 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 MKLN1Q9UL63 735 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 TMEM184BQ9Y519 407 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 GNB1P62873 340 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 FAM214AQ32MH5 1076 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 PAN3Q58A45 887 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 SPANXN4Q5MJ08 99 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 GPR155Q7Z3F1 870 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 OR4K13Q8NH42 304 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 ULBP3Q9BZM4 244 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 TXNRD2Q9NNW7 524 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 NAALAD2Q9Y3Q0 740 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 B4GAT1O43505 415 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 ARHGAP1Q07960 439 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 VMACQ2NL98 169 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 CYBRD1Q53TN4 286 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 G6PC3Q9BUM1 346 aa17.06■□□□□ 0.32
CACNA1A-227ENST00000636549 TRBV11-1A0A0K0K1C0 115 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 OAS1P00973 400 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 STSP08842 583 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 ZNF888P0CJ79 500 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 TXNRD3NBQ6F5E7 133 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 LRRN1Q6UXK5 716 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 ZNF619Q8N2I2 560 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 ZNF516Q92618 1163 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 PYURFQ96I23 114 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 FBXL20Q96IG2 436 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 TFB2MQ9H5Q4 396 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 C12orf49Q9H741 205 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 SLC39A1Q9NY26 324 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 ABRACLQ9P1F3 81 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 PCDHGA2Q9Y5H1 932 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 CREB1P16220 341 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 IL1R2P27930 398 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 GNB2P62879 340 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 ZNF674Q2M3X9 581 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 CEACAM19Q7Z692 300 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 UEVLDQ8IX04 471 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 C16orf78Q8WTQ4 265 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 FAM117AQ9C073 453 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 DECR2Q9NUI1 292 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 IGHV3-64DA0A0J9YX35 117 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 CHRM4P08173 479 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 ZNF43P17038 809 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 CHRNB2P17787 502 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 SLC6A4P31645 630 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 ACADVLP49748 655 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 RFTN1Q14699 578 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 LYSMD4Q5XG99 296 aa17.05■□□□□ 0.32
CACNA1A-227ENST00000636549 SLC22A16Q86VW1 577 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms