RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 FUT7Q11130 342 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 ANKRD34AQ69YU3 496 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 DNM1P46Q6ZS02 220 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 GRAMD2AQ8IUY3 354 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 TRIM42Q8IWZ5 723 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 CALML6Q8TD86 181 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 ROBO4Q8WZ75 1007 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 TRMT61AQ96FX7 289 aaKnown RBP16.44■□□□□ 0.22
CLN6-212ENST00000636020 RBM18Q96H35 190 aaKnown RBP16.44■□□□□ 0.22
CLN6-212ENST00000636020 BEX2Q9BXY8 128 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 C20orf96Q9NUD7 363 aaPredicted RBP16.44■□□□□ 0.22
CLN6-212ENST00000636020 MAGEB16A2A368 324 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 ANKDD1BA6NHY2 528 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 PLOD2O00469 737 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 HCRTR2O43614 444 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 THBDP07204 575 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 SLC6A12P48065 614 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 SLC37A1P57057 533 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 IL2P60568 153 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 HERVK_113P63132 956 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 ERVK-8P63133 956 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 GPS1Q13098 491 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 SLBPQ14493 270 aaKnown RBP eCLIP16.43■□□□□ 0.22
CLN6-212ENST00000636020 ZNF793Q6ZN11 406 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 RNF111Q6ZNA4 994 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 GAS2L3Q86XJ1 694 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 HES6Q96HZ4 224 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 F2RL3Q96RI0 385 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 TMEM204Q9BSN7 226 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 ERVK-6Q9BXR3 956 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 SLCO5A1Q9H2Y9 848 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 NT5DC2Q9H857 520 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 LRTM1Q9HBL6 345 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 TMEM160Q9NX00 188 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 ERVK-19Q9WJR5 959 aa16.43■□□□□ 0.22
CLN6-212ENST00000636020 REXO2Q9Y3B8 237 aaKnown RBP16.43■□□□□ 0.22
CLN6-212ENST00000636020 OR6C76A6NM76 312 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 SPRY1O43609 319 aaPredicted RBP16.42■□□□□ 0.22
CLN6-212ENST00000636020 GPRIN2O60269 458 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 SIX3O95343 332 aaPredicted RBP16.42■□□□□ 0.22
CLN6-212ENST00000636020 GNAZP19086 355 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 KIR2DL2P43627 348 aaPredicted RBP16.42■□□□□ 0.22
CLN6-212ENST00000636020 STARP49675 285 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 PCDH1Q08174 1060 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 BIKQ13323 160 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 RBM20Q5T481 1227 aaKnown RBP16.42■□□□□ 0.22
CLN6-212ENST00000636020 ADNP2Q6IQ32 1131 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 SBSNQ6UWP8 590 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 UBE3DQ7Z6J8 389 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 KRT78Q8N1N4 520 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 CNEP1R1Q8N9A8 125 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 BBOF1Q8ND07 529 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 OR1J4Q8NGS1 313 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 PLA2G12AQ9BZM1 189 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 IKZF3Q9UKT9 509 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 RNF112Q9ULX5 631 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 DTX4Q9Y2E6 619 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 EPN1Q9Y6I3 576 aaPredicted RBP16.42■□□□□ 0.22
CLN6-212ENST00000636020 PRR14LQ5THK1 2151 aa16.42■□□□□ 0.22
CLN6-212ENST00000636020 CDC7O00311 574 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 KCNAB3O43448 404 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 CGAP01215 116 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 CLPSP04118 112 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 THBS1P07996 1170 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 TBXA2RP21731 343 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 ATP5A1P25705 553 aaKnown RBP16.41■□□□□ 0.22
CLN6-212ENST00000636020 GMPRP36959 345 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 KCNJ5P48544 419 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 KCNC1P48547 511 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 LHX2P50458 406 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 GFRA1P56159 465 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 PLIN5Q00G26 463 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 TGM3Q08188 693 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 ZNF267Q14586 743 aaPredicted RBP16.41■□□□□ 0.22
CLN6-212ENST00000636020 PPP1R3AQ16821 1122 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 HSP90AA5PQ58FG0 334 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 OR2A2Q6IF42 318 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 ANGPTL8Q6UXH0 198 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 SYCE1Q8N0S2 351 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 ACOT4Q8N9L9 421 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 TP53INP1Q96A56 240 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 KCNC2Q96PR1 638 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 KRT12Q99456 494 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 OR2B2Q9GZK3 357 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 ROGDIQ9GZN7 287 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 PITHD1Q9GZP4 211 aaPredicted RBP16.41■□□□□ 0.22
CLN6-212ENST00000636020 TSPY26PQ9H489 355 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 SNX15Q9NRS6 342 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 DLGAP4Q9Y2H0 992 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 SPACA6W5XKT8 324 aa16.41■□□□□ 0.22
CLN6-212ENST00000636020 C2orf92A0A1B0GVN3 265 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 SDR42E2A6NKP2 422 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 ADAM11O75078 769 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 CDH16O75309 829 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 ALOX15P16050 662 aaPredicted RBP16.4■□□□□ 0.22
CLN6-212ENST00000636020 CPN2P22792 545 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 GABRB3P28472 473 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 TMED10P49755 219 aaKnown RBP16.4■□□□□ 0.22
CLN6-212ENST00000636020 PGGT1BP53609 377 aa16.4■□□□□ 0.22
CLN6-212ENST00000636020 RPP38P78345 283 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms