RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	TLR1	Q15399	786 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	MZT2A	Q6P582	158 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SUN5	Q8TC36	379 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ELF4	Q99607	663 aa	Predicted RBP	13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ZFYVE21	Q9BQ24	234 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	TMEM138	Q9NPI0	162 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CFL2	Q9Y281	166 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	LOC110117498-PIK3R3	F6TDL0	507 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SLC30A4	O14863	429 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	RDH16	O75452	317 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SNAP29	O95721	258 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	LHCGR	P22888	699 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	VLDLR	P98155	873 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	TAB1	Q15750	504 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	IL17RC	Q8NAC3	791 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CLEC1A	Q8NC01	280 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CHST4	Q8NCG5	386 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	C16orf78	Q8WTQ4	265 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	TOR3A	Q9H497	397 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SNTG1	Q9NSN8	517 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PCP4L1	A6NKN8	68 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ZNF726	A6NNF4	738 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997		H0Y8X5	98 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	KLK10	O43240	276 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	FRS3	O43559	492 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	TLX3	O43711	291 aa	Predicted RBP	13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PDGFB	P01127	241 aa	Predicted RBP	13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	DBI	P07108	87 aa	Known RBP	13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CES4A	Q5XG92	561 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ARL9	Q6T311	187 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	FAM131A	Q6UXB0	335 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	UNC5D	Q6UXZ4	953 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	P4HA3	Q7Z4N8	544 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	BMP8A	Q7Z5Y6	402 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	UBQLNL	Q8IYU4	475 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	DIRAS2	Q96HU8	199 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PLEKHA1	Q9HB21	404 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	DOCK1	Q14185	1865 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	RTTN	Q86VV8	2226 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	C1orf226	A1L170	272 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	NOTO	A8MTQ0	251 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	XPNPEP2	O43895	674 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	LDB3	O75112	727 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	AGR2	O95994	175 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PRL	P01236	227 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	FCER2	P06734	321 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	HBQ1	P09105	142 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	DHRS4L1	P0CG22	281 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	RPS3	P23396	243 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ACVR2A	P27037	513 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	AOAH	P28039	575 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	MNDA	P41218	407 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	INHBC	P55103	352 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	YPEL5	P62699	121 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ERV3-1	Q14264	604 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	NDUFA5	Q16718	116 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	C5orf22	Q49AR2	442 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	LRRC25	Q8N386	305 aa	Predicted RBP	13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PROKR2	Q8NFJ6	384 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	STON2	Q8WXE9	905 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	L3HYPDH	Q96EM0	354 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CD180	Q99467	661 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PLA2G2F	Q9BZM2	168 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SERINC1	Q9NRX5	453 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ACTR10	Q9NZ32	417 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SH3BGRL2	Q9UJC5	107 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	TTLL8	A6PVC2	850 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	EIF1AY	O14602	144 aa	Known RBP	13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CDC40	O60508	579 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	UQCRC2	P22695	453 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	BCAP31	P51572	246 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	KCNAB2	Q13303	367 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	VRK3	Q8IV63	474 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	FAR1	Q8WVX9	515 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	UCK2	Q9BZX2	261 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	MCCC2	Q9HCC0	563 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SLC35C2	Q9NQQ7	365 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997		A0A096LPI6	279 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PRSS38	A1L453	326 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	NME4	O00746	187 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	TNFRSF21	O75509	655 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	GSTT2	P0CG29	244 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	GSTT2B	P0CG30	244 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	TMEM196	Q5HYL7	178 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	C1orf94	Q6P1W5	598 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	GUCD1	Q96NT3	240 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SDHAF3	Q9NRP4	125 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PCDHB14	Q9Y5E9	798 aa		13.61	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ARID1A	O14497	2285 aa		13.6	□□□□□ -0.23
NEDD4L-238	ENST00000635997	LOC100130705	A0A1B0GUX0	176 aa		13.6	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ANHX	E9PGG2	379 aa		13.6	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SGK494	L7N484	410 aa		13.6	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SNPH	O15079	494 aa		13.6	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SLC6A9	P48067	706 aa		13.6	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ARSF	P54793	590 aa		13.6	□□□□□ -0.23
NEDD4L-238	ENST00000635997	RPS15A	P62244	130 aa	Known RBP	13.6	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PIGF	Q07326	219 aa		13.6	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CCSMST1	Q4G0I0	132 aa		13.6	□□□□□ -0.23
NEDD4L-238	ENST00000635997	NAGS	Q8N159	534 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms