RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, human

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00339-208	ENST00000634934	TPR	P12270	2363 aa	Known RBP	13.56	□□□□□ -0.24
LINC00339-208	ENST00000634934	VSTM2B	A6NLU5	285 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	BBIP1	A8MTZ0	92 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	TAF4	O00268	1085 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	FGF17	O60258	216 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	CTNS	O60931	367 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	C8orf89	P0DMQ9	161 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	LAMP1	P11279	417 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	DDX5	P17844	614 aa	Known RBP	13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	DLST	P36957	453 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	POLR2J	P52435	117 aa	Known RBP	13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	DGKQ	P52824	942 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	HSD17B7	P56937	341 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	C21orf58	P58505	322 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	RPS15	P62841	145 aa	Known RBP	13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	FOLH1	Q04609	750 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	STX4	Q12846	297 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	DNASE1L3	Q13609	305 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	PDE7A	Q13946	482 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	CEACAM7	Q14002	265 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	TGIF1	Q15583	401 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	PRSS53	Q2L4Q9	553 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	FAM174B	Q3ZCQ3	159 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	COQ5	Q5HYK3	327 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	SPANXN4	Q5MJ08	99 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	FAM69B	Q5VUD6	431 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	TMEM151B	Q8IW70	566 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	OR4K14	Q8NGD5	310 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	TSPEAR	Q8WU66	669 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	LRGUK	Q96M69	825 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	CDRT15	Q96T59	188 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	SPSB2	Q99619	263 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	CRB3	Q9BUF7	120 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	VN1R1	Q9GZP7	353 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	WDR54	Q9H977	334 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	PRDM9	Q9NQV7	894 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	C8orf4	Q9NR00	106 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	GIMAP4	Q9NUV9	329 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	ATAD3A	Q9NVI7	634 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	C3orf18	Q9UK00	162 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	CES1P1	Q9UKY3	287 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	ENTPD4	Q9Y227	616 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	FARSA	Q9Y285	508 aa	Known RBP	13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	ZNF780B	Q9Y6R6	833 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	USP24	Q9UPU5	2620 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	CFAP47	Q6ZTR5	3102 aa		13.55	□□□□□ -0.24
LINC00339-208	ENST00000634934	LOC101059948	A0A1B0GTJ6	334 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	FAM234B	A2RU67	622 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	IDS	B3KWA1	339 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	PDLIM1	O00151	329 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	NR5A2	O00482	541 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	AIM2	O14862	343 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	TLX3	O43711	291 aa	Predicted RBP	13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	DNAJA2	O60884	412 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	TNFAIP8	O95379	198 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	GPR75	O95800	540 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	CD63	P08962	238 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	RAB40AL	P0C0E4	278 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	UBTFL6	P0CB48	400 aa	Predicted RBP	13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	LIPC	P11150	499 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	CD1E	P15812	388 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	PPP2R1B	P30154	601 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	S100A3	P33764	101 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	FEN1	P39748	380 aa	Known RBP	13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	FOLR3	P41439	243 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	RPL5	P46777	297 aa	Known RBP	13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	XK	P51811	444 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	EMP2	P54851	167 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	KCNK10	P57789	538 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	SRSF11	Q05519	484 aa	Known RBP	13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	ART3	Q13508	389 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	TRIM25	Q14258	630 aa	Known RBP	13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	ZNF750	Q32MQ0	723 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	ZNF385B	Q569K4	471 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	FAAH2	Q6GMR7	532 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	QSOX2	Q6ZRP7	698 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	GK5	Q6ZS86	529 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	DTX1	Q86Y01	620 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	FUNDC1	Q8IVP5	155 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	TSLP	Q969D9	159 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	ANKRD9	Q96BM1	317 aa	Predicted RBP	13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	TESC	Q96BS2	214 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	ROPN1L	Q96C74	230 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	CCDC124	Q96CT7	223 aa	Known RBP	13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	RCN3	Q96D15	328 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	BBS4	Q96RK4	519 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	SLC25A23	Q9BV35	468 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	DUSP26	Q9BV47	211 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	SLC24A3	Q9HC58	644 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	SLC35C2	Q9NQQ7	365 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	PADI2	Q9Y2J8	665 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	MMACHC	Q9Y4U1	282 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	APC2	O95996	2303 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934		A0A1W2PS29	197 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	C21orf140	B9A014	251 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	PDPK1	O15530	556 aa		13.54	□□□□□ -0.24
LINC00339-208	ENST00000634934	TBX19	O60806	448 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms