RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 MAT2BQ9NZL9 334 aa13.3□□□□□ -0.28
PHACTR4-209ENST00000633371 NTMQ9P121 344 aa13.3□□□□□ -0.28
PHACTR4-209ENST00000633371 CD300AQ9UGN4 299 aa13.3□□□□□ -0.28
PHACTR4-209ENST00000633371 ZNF639Q9UID6 485 aa13.3□□□□□ -0.28
PHACTR4-209ENST00000633371 WASF3Q9UPY6 502 aa13.3□□□□□ -0.28
PHACTR4-209ENST00000633371 MRPS33Q9Y291 106 aaKnown RBP13.3□□□□□ -0.28
PHACTR4-209ENST00000633371 CFAP54Q96N23 3096 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 HRKO00198 91 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 PLOD2O00469 737 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 DNAJC8O75937 253 aaPredicted RBP13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 CLPSP04118 112 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 KLK3P07288 261 aaPredicted RBP13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 DDX5P17844 614 aaKnown RBP13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 AGXTP21549 392 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 UQCRC2P22695 453 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 MPIP34949 423 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 STT3AP46977 705 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 MRPS35P82673 323 aaKnown RBP13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 LRRC74AQ0VAA2 488 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 TRMT12Q53H54 448 aaKnown RBP13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 PIGGQ5H8A4 983 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 COX20Q5RI15 118 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 SAXO2Q658L1 398 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 TMEM107Q6UX40 140 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 C16orf89Q6UX73 402 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 LANCL3Q6ZV70 420 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 CALHM3Q86XJ0 350 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 SAMD14Q8IZD0 417 aaPredicted RBP13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 ZFP28Q8NHY6 868 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 ZNF675Q8TD23 568 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 CT55Q8WUE5 264 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 FAM120BQ96EK7 910 aaKnown RBP13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 GIMAP5Q96F15 307 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 SLC35A5Q9BS91 424 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 THTPAQ9BU02 230 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 WDR54Q9H977 334 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 CXorf21Q9HAI6 301 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 TPT1P8Q9HAU6 139 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 GIMAP4Q9NUV9 329 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 C14orf105Q9NVL8 296 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 MKL2Q9ULH7 1088 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 VPS4AQ9UN37 437 aa13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.29□□□□□ -0.28
PHACTR4-209ENST00000633371 SPTBN2O15020 2390 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 PRORSD1PA6NEY8 169 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 IDSB3KWA1 339 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 CLIC1O00299 241 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 UPK1AO00322 258 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 CBX7O95931 251 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 UMODP07911 640 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 GPX2P18283 190 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 F8A1P23610 371 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 MC3RP41968 323 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 CCT3P49368 545 aaKnown RBP13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 RASSF2P50749 326 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 CASP9P55211 416 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 OCA2Q04671 838 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 MAP4K2Q12851 820 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 MAP7Q14244 749 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 NCF4Q15080 339 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 MINDY4Q4G0A6 757 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 DNAL1Q4LDG9 190 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 EXOSC6Q5RKV6 272 aaKnown RBP13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 FAAH2Q6GMR7 532 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 IGF2-ASQ6U949 168 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 TMEM205Q6UW68 189 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 TMEM64Q6YI46 380 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 ST13P4Q8IZP2 240 aaPredicted RBP13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 OR8J3Q8NGG0 315 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 PTPMT1Q8WUK0 201 aaPredicted RBP13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 NEURL3Q96EH8 262 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 ZNF583Q96ND8 569 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 KAT8Q9H7Z6 458 aaKnown RBP13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 PADI1Q9ULC6 663 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 PCDHGB4Q9UN71 923 aa13.28□□□□□ -0.28
PHACTR4-209ENST00000633371 RNF103-CHMP3A0A140T963 221 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 A8MUA0 341 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 PLOD3O60568 738 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 PDE5AO76074 875 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 PSMG1O95456 288 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 DDAH2O95865 285 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 NQO1P15559 274 aaKnown RBP13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 NT5EP21589 574 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 GALNSP34059 522 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 PGM1P36871 562 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 GSK3BP49841 420 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 EMP2P54851 167 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 STX4Q12846 297 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 SERTAD2Q14140 314 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 EXOSC7Q15024 291 aaKnown RBP13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 ADRM1Q16186 407 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 MFSD4BQ5TF39 518 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 BNC2Q6ZN30 1099 aaPredicted RBP13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 C6orf120Q7Z4R8 191 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 ANKRD37Q7Z713 158 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 OR2L13Q8N349 312 aa13.27□□□□□ -0.29
PHACTR4-209ENST00000633371 RNF148Q8N7C7 305 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms