RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 MAPKAP1Q9BPZ7 522 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 OCEL1Q9H607 264 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 RHCGQ9UBD6 479 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 SEC14L3Q9UDX4 400 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 TMX2-CTNND1H3BSU7 103 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 SOX1O00570 391 aaPredicted RBP18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 FHP07954 510 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 MAGP20916 626 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 MPIP34949 423 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 RABIFP47224 123 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 PRKAG1P54619 331 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 ILF3Q12906 894 aaKnown RBP eCLIP18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 TCTN3Q6NUS6 607 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 ABI3BPQ7Z7G0 1075 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 TRIM73Q86UV7 250 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 OR56A1Q8NGH5 318 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 MIPOL1Q8TD10 442 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 ZFPM2Q8WW38 1151 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 TM4SF19Q96DZ7 209 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 WARS2Q9UGM6 360 aaKnown RBP18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 ENOPH1Q9UHY7 261 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 NINQ8N4C6 2090 aa18.6■□□□□ 0.57
PCDHB11-202ENST00000624887 RGS10O43665 173 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 VIPP01282 170 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 HMGN2P05204 90 aaKnown RBP18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 SLC35G6P0C7Q6 338 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 ZNF888P0CJ79 500 aaPredicted RBP18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 C8orf89P0DMQ9 161 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 ALPPL2P10696 532 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 UGT2B7P16662 529 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 FEN1P39748 380 aaKnown RBP18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 NFATC3Q12968 1075 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 GPR18Q14330 331 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 ZNF770Q6IQ21 691 aaPredicted RBP18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 KRT73Q86Y46 540 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 TAGAPQ8N103 731 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 OR13H1Q8NG92 308 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 RHOXF1Q8NHV9 184 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 UTP15Q8TED0 518 aaKnown RBP18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 DHRS1Q96LJ7 313 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 ZNF681Q96N22 645 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 OR2A5Q96R48 311 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 RHNO1Q9BSD3 238 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 FUNDC2Q9BWH2 189 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 NMNAT1Q9HAN9 279 aaPredicted RBP18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 BCL2L10Q9HD36 194 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 GIMAP4Q9NUV9 329 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 ARHGEF17Q96PE2 2063 aaPredicted RBP18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 PRAMEF26H0Y7S4 382 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 NARSO43776 548 aaKnown RBP18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 SEMA7AO75326 666 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 IGHV4-34P06331 123 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 ACVR2AP27037 513 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 PTGER1P34995 402 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 MAPK10P53779 464 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 CRISP3P54108 245 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 LASP1Q14847 261 aaKnown RBP18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 CCDC85BQ15834 202 aaPredicted RBP18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 MLIPQ5VWP3 458 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 TMEM107Q6UX40 140 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 PRSS48Q7RTY5 328 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 P3H2Q8IVL5 708 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 TRIM48Q8IWZ4 208 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 SLC22A18ASQ8N1D0 253 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 AQP11Q8NBQ7 271 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 BBS10Q8TAM1 723 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 GPBAR1Q8TDU6 330 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 GAB3Q8WWW8 586 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 RORBQ92753 470 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 SIGLEC11Q96RL6 698 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 CSF3RQ99062 836 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 C6orf106Q9H6K1 298 aaPredicted RBP18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 PLCXD1Q9NUJ7 323 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 ACTR10Q9NZ32 417 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 PSME2Q9UL46 239 aa18.59■□□□□ 0.57
PCDHB11-202ENST00000624887 A0A1W2PS29 197 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 OR6C74A6NCV1 312 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 TNFP01375 233 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 IGLV3-19P01714 112 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 MT-ND2P03891 347 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 NR2F6P10588 404 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 POLR2CP19387 275 aaPredicted RBP18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 GSSP48637 474 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 PRR5P85299 388 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 TEKQ02763 1124 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 MVKQ03426 396 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 GNA13Q14344 377 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 DEPDC4Q8N2C3 294 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 SVOPQ8N4V2 548 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 OR4D11Q8NGI4 311 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 GTPBP3Q969Y2 492 aaKnown RBP18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 PHF7Q9BWX1 381 aaPredicted RBP18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 ROGDIQ9GZN7 287 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 ANKMY1Q9P2S6 941 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 ACAD8Q9UKU7 415 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 ZNF780BQ9Y6R6 833 aa18.58■□□□□ 0.56
PCDHB11-202ENST00000624887 EMC8O43402 210 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 CTSVO60911 334 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 GASTP01350 101 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 SMIM10L1P0DMW3 83 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms