RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 KAT8Q9H7Z6 458 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 Q9N2J8 555 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 MARCH5Q9NX47 278 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 MKLN1Q9UL63 735 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 SSR3Q9UNL2 185 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 BACE2Q9Y5Z0 518 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 MDC1Q14676 2089 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 LOC100509620A0A075B734 347 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 FAM221BA6H8Z2 402 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 GRXCR2A6NFK2 248 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 YY2O15391 372 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 HLA-FP30511 346 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 CASRP41180 1078 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 CDKN2CP42773 168 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 EIF2B2P49770 351 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 RAB25P57735 213 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 OR12D2P58182 307 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 DSTNP60981 165 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 TBPL1P62380 186 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 SLAMF1Q13291 335 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 DGUOKQ16854 277 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 FAM69BQ5VUD6 431 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 CARD17Q5XLA6 110 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 USP30Q70CQ3 517 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 VTCN1Q7Z7D3 282 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 PRR22Q8IZ63 422 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 SDR16C5Q8N3Y7 309 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 SLC22A8Q8TCC7 542 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 KLHL6Q8WZ60 621 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 MYDGFQ969H8 173 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 MSLNLQ96KJ4 702 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 CASD1Q96PB1 797 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 OR1F2PQ96R84 312 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 BARD1Q99728 777 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 PDE7BQ9NP56 450 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 GPRC5BQ9NZH0 403 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 LHX3Q9UBR4 397 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 ADAM30Q9UKF2 790 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 SCDO00767 359 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 HTR1AP08908 422 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 ZDHHC11BP0C7U3 371 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 EBLN1P0CF75 366 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 MRPL19P49406 292 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 EMX1Q04741 257 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 CDK5R2Q13319 367 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 DOC2AQ14183 400 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 MRPL58Q14197 206 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 ERV3-1Q14264 604 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 SMN1Q16637 294 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 FAM214AQ32MH5 1076 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 FAM78AQ5JUQ0 283 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 TMEM236Q5W0B7 351 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 CXXC5Q7LFL8 322 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 AMIGO1Q86WK6 493 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 HTRA1Q92743 480 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF775Q96BV0 537 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 OTUB2Q96DC9 234 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 RDH12Q96NR8 316 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 CCDC115Q96NT0 180 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 PCNX1Q96RV3 2341 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 TTYH2Q9BSA4 534 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 PBX4Q9BYU1 374 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 CLMPQ9H6B4 373 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 MAFFQ9ULX9 164 aa7.89□□□□□ -1.15
PTPDC1-204ENST00000620992 ZFHX2Q9C0A1 2572 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 CDC14CA4D256 554 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 KHDRBS3O75525 346 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 CLEC3AO75596 197 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 CD160O95971 181 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ADH1BP00325 375 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 JUNBP17275 347 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 IDUAP35475 653 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 SPINT3P49223 89 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 PSMD4P55036 377 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ITGA1P56199 1179 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ISL1P61371 349 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ZNF846Q147U1 533 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 TIMM50Q3ZCQ8 353 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 C9orf50Q5SZB4 431 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 RBM12BQ8IXT5 1001 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 TCEAL8Q8IYN2 117 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ZBTB8BQ8NAP8 495 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 OR2L5Q8NG80 312 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 OR5T3Q8NGG3 340 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 NDNFQ8TB73 568 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 WFDC5Q8TCV5 224 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 HLA-CQ95604 372 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 RHNO1Q9BSD3 238 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 GPN2Q9H9Y4 310 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 MAGEE1Q9HCI5 957 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 PAK1IP1Q9NWT1 392 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 DNMT3BQ9UBC3 853 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 ABCG2Q9UNQ0 655 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 RPH3AQ9Y2J0 694 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 TANC1Q9C0D5 1861 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 A0A1W2PPK0 400 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 H7C0S8 307 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 CCNB2O95067 398 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 PRSS23O95084 383 aa7.88□□□□□ -1.15
PTPDC1-204ENST00000620992 IL3P08700 152 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms