RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 GLT8D1Q68CQ7 371 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 HMBOX1Q6NT76 420 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 PLEKHG7Q6ZR37 379 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 SHISA6Q6ZSJ9 500 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 UEVLDQ8IX04 471 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 CPXM2Q8N436 756 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 ZNF784Q8NCA9 323 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-219ENST00000620786 OR8J3Q8NGG0 315 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 RAB6CQ9H0N0 254 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 KCNK12Q9HB15 430 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 ZNF334Q9HCZ1 680 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-219ENST00000620786 AASSQ9UDR5 926 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 KLHL21Q9UJP4 597 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 PTGDR2Q9Y5Y4 395 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 BCAT2O15382 392 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-219ENST00000620786 EXOC3L2Q2M3D2 409 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 PM20D1Q6GTS8 502 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 TMIEQ8NEW7 156 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 PITX2Q99697 317 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 CLSTN3Q9BQT9 956 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 DNMT3BQ9UBC3 853 aaKnown RBP10.85□□□□□ -0.67
CLIP1-219ENST00000620786 PISDQ9UG56 409 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 RPH3AQ9Y2J0 694 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-219ENST00000620786 C17orf105B2RV13 164 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 ABCB7O75027 752 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 AK4P27144 223 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-219ENST00000620786 FASLGP48023 281 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 CDK3Q00526 305 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 C15orf39Q6ZRI6 1047 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 HSD11B1LQ7Z5J1 315 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 TRMT10AQ8TBZ6 339 aaKnown RBP10.85□□□□□ -0.67
CLIP1-219ENST00000620786 S100A16Q96FQ6 103 aaKnown RBP10.85□□□□□ -0.67
CLIP1-219ENST00000620786 DOHHQ9BU89 302 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 CDH20Q9HBT6 801 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 STOX2Q9P2F5 926 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-219ENST00000620786 GJD2Q9UKL4 321 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 HIDE1A8MVS5 230 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 TMEM189-UBE2V1I3L0A0 370 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 RFXAPO00287 272 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 SLC33A1O00400 549 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-219ENST00000620786 PEX14O75381 377 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 CLCA4Q14CN2 919 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 TCEAL1Q15170 157 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 PARS2Q7L3T8 475 aaKnown RBP10.85□□□□□ -0.67
CLIP1-219ENST00000620786 PDZD3Q86UT5 571 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 TP53INP2Q8IXH6 220 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 LAS2Q8IYD9 372 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 FTMTQ8N4E7 242 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 INO80EQ8NBZ0 244 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-219ENST00000620786 OR8S1Q8NH09 359 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 ABCD2Q9UBJ2 740 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 EFCAB7A8K855 629 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 CLDN25C9JDP6 229 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 F8A1P23610 371 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 VAMP1P23763 118 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 RBM34P42696 430 aaKnown RBP10.85□□□□□ -0.67
CLIP1-219ENST00000620786 ADAM15Q13444 863 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 SERTAD2Q14140 314 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 NANOGP8Q6NSW7 305 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 PNCKQ6P2M8 343 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 TIGD4Q8IY51 512 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 SFXN2Q96NB2 322 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 PKP2Q99959 881 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 NANOGQ9H9S0 305 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 HCSTQ9UBK5 93 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 ACSL6Q9UKU0 697 aa10.85□□□□□ -0.67
CLIP1-219ENST00000620786 KIR2DS5A0A0G2JLQ3 304 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 A0A0G2JNG1 304 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 ZSCAN5BA6NJL1 495 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 ANHXE9PGG2 379 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 KIR2DS3K7RE56 304 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 SLC22A1O15245 554 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 MAOBP27338 520 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 MRPS21P82921 87 aaKnown RBP10.84□□□□□ -0.67
CLIP1-219ENST00000620786 EEF1A2Q05639 463 aaKnown RBP10.84□□□□□ -0.67
CLIP1-219ENST00000620786 KIR2DS5Q14953 304 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 CDK10Q15131 360 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 KLHDC10Q6PID8 442 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 PSD4Q8NDX1 1056 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 STRA6Q9BX79 667 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 CWH43Q9H720 699 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 TRNAU1APQ9NX07 287 aaKnown RBP10.84□□□□□ -0.67
CLIP1-219ENST00000620786 KCMF1Q9P0J7 381 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 CCDC88AQ3V6T2 1871 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 C8BP07358 591 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 HSD11B2P80365 405 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 C1orf220Q5T0J3 134 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 NDUFAF5Q5TEU4 345 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 GRHL2Q6ISB3 625 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 DUS1LQ6P1R4 473 aaKnown RBP10.84□□□□□ -0.67
CLIP1-219ENST00000620786 PRR22Q8IZ63 422 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 RXFP3Q9NSD7 469 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 ZNF701Q9NV72 531 aaPredicted RBP10.84□□□□□ -0.67
CLIP1-219ENST00000620786 CCDC59Q9P031 241 aaKnown RBP10.84□□□□□ -0.67
CLIP1-219ENST00000620786 LRIT1Q9P2V4 623 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 ADAM18Q9Y3Q7 739 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 RGPD2P0DJD1 1756 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 SLC9B1P1A6NJY1 282 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 SMAD6O43541 496 aaKnown RBP10.84□□□□□ -0.67
CLIP1-219ENST00000620786 RDH16O75452 317 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms