RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 MMP11P24347 488 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 HOXC5Q00444 222 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 SYPL1Q16563 259 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 OR2G6Q5TZ20 316 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 ACSM5Q6NUN0 579 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 PARS2Q7L3T8 475 aaKnown RBP19.31■□□□□ 0.68
NEK3-208ENST00000618534 RDH10Q8IZV5 341 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 TM4SF18Q96CE8 201 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 ZNF582Q96NG8 517 aaPredicted RBP19.31■□□□□ 0.68
NEK3-208ENST00000618534 F2RL3Q96RI0 385 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 NRTNQ99748 197 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 TESQ9UGI8 421 aaKnown RBP19.31■□□□□ 0.68
NEK3-208ENST00000618534 PRAMEF27A3QJZ7 478 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 RPS25P62851 125 aaKnown RBP19.31■□□□□ 0.68
NEK3-208ENST00000618534 CNTN1Q12860 1018 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 GINS1Q14691 196 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 SLC35F1Q5T1Q4 408 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 OLIG3Q7RTU3 272 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 FAM129CQ86XR2 697 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 VWA5B2Q8N398 1253 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 SMPDL3AQ92484 453 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 EXOSC8Q96B26 276 aaKnown RBP19.31■□□□□ 0.68
NEK3-208ENST00000618534 TREX2Q9BQ50 279 aaPredicted RBP19.31■□□□□ 0.68
NEK3-208ENST00000618534 EPHX3Q9H6B9 360 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 HCFC1R1Q9NWW0 138 aa19.31■□□□□ 0.68
NEK3-208ENST00000618534 ALDH1A1P00352 501 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 TSPAN19P0C672 248 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 MYL9P24844 172 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 SLC9A3P48764 834 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 NFE2L1Q14494 772 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 GPAT3Q53EU6 434 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 PYDC2Q56P42 97 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 LY6G5CQ5SRR4 150 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 DDI2Q5TDH0 399 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 ZER1Q7Z7L7 766 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 HMGN2P46Q86SG4 172 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 GDPD1Q8N9F7 314 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 SIMC1Q8NDZ2 872 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 TM9SF4Q92544 642 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 ZNF607Q96SK3 696 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 GPA33Q99795 319 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 NEUROD4Q9HD90 331 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 C8AP07357 584 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 SYN1P17600 705 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 WEE1P30291 646 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 GPC1P35052 558 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 METAP1P53582 386 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 SMIM11AP58511 58 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 BNC1Q01954 994 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 ALDH6A1Q02252 535 aaKnown RBP19.3■□□□□ 0.68
NEK3-208ENST00000618534 TLE2Q04725 743 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 NOXA1Q86UR1 476 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 LAPTM4BQ86VI4 370 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 KRT78Q8N1N4 520 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 CAMKK1Q8N5S9 505 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 DTD2Q96FN9 168 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 KCTD7Q96MP8 289 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 TOR4AQ9NXH8 423 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 AHSPQ9NZD4 102 aa19.3■□□□□ 0.68
NEK3-208ENST00000618534 NUP210Q8TEM1 1887 aaPredicted RBP19.29■□□□□ 0.68
NEK3-208ENST00000618534 LAMA2P24043 3122 aaKnown RBP19.29■□□□□ 0.68
NEK3-208ENST00000618534 POLR1CO15160 346 aaPredicted RBP19.29■□□□□ 0.68
NEK3-208ENST00000618534 PLA2G10O15496 165 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 PI15O43692 258 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 OR12D1P0DN82 309 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 BSGP35613 385 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 WNT4P56705 351 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 KHDRBS2Q5VWX1 349 aaKnown RBP19.29■□□□□ 0.68
NEK3-208ENST00000618534 SZRD1Q7Z422 152 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 IQCHQ86VS3 1027 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 ZNF547Q8IVP9 402 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 OR4K5Q8NGD3 323 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 OR5D16Q8NGK9 328 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 UBASH3BQ8TF42 649 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 C1GALT1C1Q96EU7 318 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 KATNB1Q9BVA0 655 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 ZDHHC5Q9C0B5 715 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 TMEM245Q9H330 911 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 SPHK2Q9NRA0 654 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 MAFFQ9ULX9 164 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 CKAP5Q14008 2032 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 CCL16O15467 120 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 SEC14L5O43304 696 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 EPHX1P07099 455 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 DDX5P17844 614 aaKnown RBP19.29■□□□□ 0.68
NEK3-208ENST00000618534 MYL12AP19105 171 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 KIR2DL3P43628 341 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 GIPRP48546 466 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 GAS1P54826 345 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 CAV3P56539 151 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 PCBP4P57723 403 aaKnown RBP19.29■□□□□ 0.68
NEK3-208ENST00000618534 CD83Q01151 205 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 Q5BKY6 102 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 MEX3DQ86XN8 651 aaKnown RBP19.29■□□□□ 0.68
NEK3-208ENST00000618534 TRIM48Q8IWZ4 208 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 NRSN1Q8IZ57 195 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 ANKRD53Q8N9V6 530 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 FGF11Q92914 225 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 UCN3Q969E3 161 aa19.29■□□□□ 0.68
NEK3-208ENST00000618534 TCEAL4Q96EI5 215 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms