RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 GGT5P36269 586 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 CASP3P42574 277 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 CASP2P42575 452 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 MARCKSL1P49006 195 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ARFIP2P53365 341 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 NAGLUP54802 743 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 PLIN5Q00G26 463 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 CSHL1Q14406 222 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 CCDC181Q5TID7 509 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 USP43Q70EL4 1123 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 CCDC170Q8IYT3 715 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ST13P4Q8IZP2 240 aaPredicted RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 TCAIMQ8N3R3 496 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 LRRC57Q8N9N7 239 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 FAM71DQ8N9W8 422 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 OR10G3Q8NGC4 313 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 HPS1Q92902 700 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 FBXW5Q969U6 566 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ERP27Q96DN0 273 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 PGM2Q96G03 612 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 SNF8Q96H20 258 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ZNF845Q96IR2 970 aaPredicted RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 RADILQ96JH8 1075 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 FAR2Q96K12 515 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 KCNC2Q96PR1 638 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 RHNO1Q9BSD3 238 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 FAM167BQ9BTA0 163 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 DOHHQ9BU89 302 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 MED18Q9BUE0 208 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 BEX2Q9BXY8 128 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ALOXE3Q9BYJ1 711 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ACTR8Q9H981 624 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 NHEJ1Q9H9Q4 299 aaPredicted RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 FAIMQ9NVQ4 179 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 TRMT1Q9NXH9 659 aaKnown RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 PAQR5Q9NXK6 330 aaPredicted RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 GALPQ9UBC7 116 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 PHF11Q9UIL8 331 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 CRYL1Q9Y2S2 319 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 RNF115Q9Y4L5 304 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 AP4B1Q9Y6B7 739 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 DSCAMO60469 2012 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ETHE1O95571 254 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ALOX15P16050 662 aaPredicted RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 NMBRP28336 390 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 HNRNPFP52597 415 aaKnown RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 GDF10P55107 478 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 B3GALT5-AS1P59052 145 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 OLR1P78380 273 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 TIAL1Q01085 375 aaKnown RBP eCLIP4.13□□□□□ -1.75
SNCA-213ENST00000618500 SLC13A2Q13183 592 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 POU4F3Q15319 338 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 PPP1R3AQ16821 1122 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 TMEM44Q2T9K0 475 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 TRIM40Q6P9F5 258 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ANKMY2Q8IV38 441 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 KRT78Q8N1N4 520 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 MYO1HQ8N1T3 1032 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 TEX29Q8N6K0 151 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 TC2NQ8N9U0 490 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 STEAP2Q8NFT2 490 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ADIPOR1Q96A54 375 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 RILPQ96NA2 401 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 DGAT2Q96PD7 388 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 POTEKPQ9BYX7 375 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 SHCBP1LQ9BZQ2 653 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 NGBQ9NPG2 151 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 PRDM7Q9NQW5 492 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 LYARQ9NX58 379 aaKnown RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 BFARQ9NZS9 450 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 KCNS2Q9ULS6 477 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 MAPRE3Q9UPY8 281 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 RUVBL2Q9Y230 463 aaKnown RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 MTORP42345 2549 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 IGLV3-32A0A0A0MS00 114 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 C7orf72A4D263 438 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 MFAP3LO75121 409 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 H2AFYO75367 372 aaKnown RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 PPM1BO75688 479 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 TBX6O95947 436 aaPredicted RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 SERPINC1P01008 464 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 C1GALT1C1LP0DN25 315 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 NID1P14543 1247 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ZNF17P17021 662 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 MAGEA3P43357 314 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 BTN3A2P78410 334 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 KBTBD12Q3ZCT8 623 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 FAM166AQ6J272 317 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 C12orf54Q6X4T0 127 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 RNF111Q6ZNA4 994 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 SLCO4C1Q6ZQN7 724 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 PALM2Q8IXS6 379 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 FADS6Q8N9I5 356 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 ADCY4Q8NFM4 1077 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 OR1J4Q8NGS1 313 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 C10orf105Q8TEF2 133 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 AKAP1Q92667 903 aaKnown RBP eCLIP4.13□□□□□ -1.75
SNCA-213ENST00000618500 NEIL2Q969S2 332 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 VPS39Q96JC1 886 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 OSBPL11Q9BXB4 747 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms