RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 RPS13P62277 151 aaKnown RBP12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 TEKQ02763 1124 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 SIGLEC14Q08ET2 396 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 Q6ZVL8 140 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 SLC30A8Q8IWU4 369 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 LHFPL5Q8TAF8 219 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 BTN2A2Q8WVV5 523 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 ASB12Q8WXK4 309 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 SORCS1Q8WY21 1168 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 SLC35A5Q9BS91 424 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 PPA2Q9H2U2 334 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 HCN3Q9P1Z3 774 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 HOXB6P17509 224 aaKnown RBP12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 CD22P20273 847 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 TALDO1P37837 337 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 ETV5P41161 510 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 CSNK1DP48730 415 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 ETV1P50549 477 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 AGFG1P52594 562 aaKnown RBP12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 SCARB2Q14108 478 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 UNC5DQ6UXZ4 953 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 PLPP6Q8IY26 295 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 COQ8AQ8NI60 647 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 SLC9A6Q92581 669 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 RAB8BQ92930 207 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 RBPMSQ93062 196 aaKnown RBP12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 LINC00052Q96N35 136 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 SAMD11Q96NU1 681 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 HTATIP2Q9BUP3 242 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 TAPBPLQ9BX59 468 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 POLR2J3Q9H1A7 115 aaKnown RBP12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 SLC35C2Q9NQQ7 365 aa12.74□□□□□ -0.37
PCDHA11-202ENST00000616325 CASP8AP2Q9UKL3 1982 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 TRBV4-1A0A0J9YWV2 114 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 KDM4BO94953 1096 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 XKP51811 444 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 CLDN20P56880 219 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 B4GALNT1Q00973 533 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 HEPACAMQ14CZ8 416 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 BICRALQ6AI39 1079 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 FATE1Q969F0 183 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 MARC2Q969Z3 335 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 C11orf24Q96F05 449 aaPredicted RBP12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 CMTM7Q96FZ5 175 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 TOE1Q96GM8 510 aaKnown RBP12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 COQ10AQ96MF6 247 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 TOR1AO14656 332 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 CHP2O43745 196 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 MTRF1O75570 445 aaKnown RBP12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 RGS11O94810 467 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 IGSF6O95976 241 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 ACADMP11310 421 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 HBA1P69905 142 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 GPR176Q14439 515 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 TCEA2Q15560 299 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 ALG1LQ6GMV1 187 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 ZNF782Q6ZMW2 699 aaPredicted RBP12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 SRFBP1Q8NEF9 429 aaKnown RBP12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 OR2T35Q8NGX2 323 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 DNAJB8Q8NHS0 232 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 CSGALNACT1Q8TDX6 532 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 SOCS4Q8WXH5 440 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 KCNN2Q9H2S1 579 aa12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 RPL36Q9Y3U8 105 aaKnown RBP12.73□□□□□ -0.37
PCDHA11-202ENST00000616325 SLC9A3R1O14745 358 aaPredicted RBP12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 PROM1O43490 865 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 LANCL1O43813 399 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 SLC16A8O95907 504 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 ANXA3P12429 323 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 CYBAP13498 195 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 XPAP23025 273 aaPredicted RBP12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 ERVFC1P60507 584 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 SRSF11Q05519 484 aaKnown RBP12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 TUSC1Q2TAM9 212 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 CLVS2Q5SYC1 327 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 HSDL2Q6YN16 418 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 THOC6Q86W42 341 aaKnown RBP12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 FTMTQ8N4E7 242 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 LRR1Q96L50 414 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 WDFY2Q96P53 400 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 NRTNQ99748 197 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 SLC29A3Q9BZD2 475 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 ENAMQ9NRM1 1142 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 ACER3Q9NUN7 267 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 MRPL15Q9P015 296 aaKnown RBP12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 CFAP97Q9P2B7 532 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 B4GALT6Q9UBX8 382 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 BAIAP2Q9UQB8 552 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 CLCA2Q9UQC9 943 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 SLC45A1Q9Y2W3 748 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 CHD5Q8TDI0 1954 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 ANKDD1BA6NHY2 528 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 CH25HO95992 272 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 IL1AP01583 271 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 GALTP07902 379 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 NUP62P37198 522 aaPredicted RBP12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 MLIPQ5VWP3 458 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 C17orf107Q6ZR85 190 aa12.72□□□□□ -0.37
PCDHA11-202ENST00000616325 NPAS3Q8IXF0 933 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms