RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ACAP2Q15057 778 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 TMEM64Q6YI46 380 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 SEM1Q6ZVN7 128 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 CCDC91Q7Z6B0 441 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 NUDT13Q86X67 352 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 LIX1Q8N485 282 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 ZNF441Q8N8Z8 693 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 MYRIPQ8NFW9 859 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 PCDHGB3Q9Y5G1 929 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 HRNRQ86YZ3 2850 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 A0A096LPK6 155 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 C2orf92A0A1B0GVN3 265 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 CCDC189A1A4V9 331 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 FAM47E-STBD1D6RA91 191 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 TRIM3O75382 744 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 KLHL2O95198 593 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 SLC35E2P0CK97 266 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 SSTR4P31391 388 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 ARSKQ6UWY0 536 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 TAGAPQ8N103 731 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 L3MBTL4Q8NA19 623 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 DIO2Q92813 273 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 ZNF597Q96LX8 424 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 GPR78Q96P69 363 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 CDK15Q96Q40 435 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 WDR41Q9HAD4 459 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 RYDENQ9NUL5 291 aaKnown RBP19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 PSD3Q9NYI0 1048 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 CPSF2Q9P2I0 782 aaKnown RBP19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 B4GALT7Q9UBV7 327 aa19.07■□□□□ 0.64
TRAPPC3-208ENST00000616074 ANKHD1Q8IWZ3 2542 aaKnown RBP19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 FOXE1O00358 373 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 PGRMC2O15173 223 aa19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 CT62P0C5K7 136 aa19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 GDF1P27539 372 aa19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 FBXW4P57775 412 aa19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 DUSP8Q13202 625 aa19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 RPS6KA2Q15349 733 aa19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 UAP1Q16222 522 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 BICRALQ6AI39 1079 aa19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 OR52E8Q6IFG1 317 aa19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 ZZZ3Q8IYH5 903 aa19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 NAXEQ8NCW5 288 aa19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 CXorf21Q9HAI6 301 aa19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 TEX10Q9NXF1 929 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 DNAJB12Q9NXW2 375 aaKnown RBP19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 TNPO3Q9Y5L0 923 aaKnown RBP19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 MAP1AP78559 2803 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC3-208ENST00000616074 KIAA1549Q9HCM3 1950 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 C15orf38-AP3S2A0A0A6YYH1 394 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 ESYT3A0FGR9 886 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 ANKRD33BA6NCL7 494 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 KDM4EB2RXH2 506 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 OR7A17O14581 309 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 CTAG2O75638 210 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 CLDN9O95484 217 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 ALDOAP04075 364 aaKnown RBP19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 IST1P53990 364 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 TECRLQ5HYJ1 363 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 TBCELQ5QJ74 424 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 TMEM198Q66K66 360 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 KLC3Q6P597 504 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 GALNT12Q8IXK2 581 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 RELL2Q8NC24 303 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 OR52B6Q8NGF0 335 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 TP53INP1Q96A56 240 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 NOL11Q9H8H0 719 aaKnown RBP19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 AKAP6Q13023 2319 aa19.05■□□□□ 0.64
TRAPPC3-208ENST00000616074 HSPB2A8KAH6 182 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 TP53I11O14683 189 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 SEMA3DO95025 777 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 PIK3R1P27986 724 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 ARL1P40616 181 aaPredicted RBP19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 SERPINB8P50452 374 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 WNT3P56703 355 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 CRYZQ08257 329 aaKnown RBP19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 FUT7Q11130 342 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 HSPB2Q16082 182 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 ACSF3Q4G176 576 aaPredicted RBP19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 UBAP2Q5T6F2 1119 aaKnown RBP19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 PLD6Q8N2A8 252 aaKnown RBP19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 ZNF615Q8N8J6 731 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 PTGR2Q8N8N7 351 aaPredicted RBP19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 TNIP2Q8NFZ5 429 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 SPPL2AQ8TCT8 520 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 ADIPOR1Q96A54 375 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 RILPQ96NA2 401 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 SERPINI1Q99574 410 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 VPS11Q9H270 941 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 ZNF358Q9NW07 568 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 NPFFR2Q9Y5X5 522 aa19.04■□□□□ 0.64
TRAPPC3-208ENST00000616074 VPS13CQ709C8 3753 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 CAPN14A8MX76 684 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 TRAPPC6AO75865 159 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 BMP5P22003 454 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 TYK2P29597 1187 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 CASQ1P31415 396 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 UQCRC1P31930 480 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 KIR2DL3P43628 341 aa19.03■□□□□ 0.64
TRAPPC3-208ENST00000616074 FNDC7Q5VTL7 733 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms