RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 PRRC1Q96M27 445 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 IDI2Q9BXS1 227 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 CUEDC2Q9H467 287 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 SMYD3Q9H7B4 428 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 SLC28A3Q9HAS3 691 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 SEBOXQ9HB31 216 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 LY9Q9HBG7 655 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 SGK2Q9HBY8 427 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 APMAPQ9HDC9 416 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 YAE1D1Q9NRH1 226 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 PIGVQ9NUD9 493 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 CNOT2Q9NZN8 540 aaKnown RBP2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 NDUFA13Q9P0J0 144 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 TMEM184BQ9Y519 407 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 MAD1L1Q9Y6D9 718 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 SLCO1B1Q9Y6L6 691 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 EVC2Q86UK5 1308 aa2.39□□□□□ -2.03
HMGB1P24-202ENST00000615653 A0A087WUV0 522 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 CCDC162PA2VCL2 907 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR5K3A6NET4 321 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 ANKDD1BA6NHY2 528 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 DUXAA6NLW8 204 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 C12orf71A8MTZ7 269 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 C9JVG2 144 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 FAM90A26D6RGX4 464 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 TRIM77I1YAP6 450 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 IFNL4K9M1U5 179 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 EEF2KO00418 725 aaKnown RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 ANKRD28O15084 1053 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZNF264O43296 627 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 ECE2O60344 883 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 SDC3O75056 442 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 MYO1DO94832 1006 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 CDK14O94921 469 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 PIGNO95427 931 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 MBP02144 154 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 LYNP07948 512 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 SFTPBP07988 381 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 RAB40ALP0C0E4 278 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 PABPC4LP0CB38 370 aaKnown RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 PIK3R1P27986 724 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 ACADLP28330 430 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 TRIM23P36406 574 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 HSD17B3P37058 310 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 DCTP40126 519 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 APOBEC1P41238 236 aaKnown RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 FNTAP49354 379 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 RGS7P49802 495 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 CCNHP51946 323 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 ARHGDIBP52566 201 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 CDH4P55283 916 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 LINC01547P58512 204 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 VBP1P61758 197 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 TSPAN5P62079 268 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 RPS15P62841 145 aaKnown RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 CACNG1Q06432 222 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 DMPKQ09013 629 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 CALCOCO2Q13137 446 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 DGCR6Q14129 220 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 NR1D2Q14995 579 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 DLG2Q15700 870 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 SNCBQ16143 134 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 MAPK6Q16659 721 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZNF829Q3KNS6 432 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 PDLIM3Q53GG5 364 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 RABGAP1LQ5R372 815 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 PRAMEF7Q5VXH5 474 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 RAET1LQ5VY80 246 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 TTC23Q5W5X9 447 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 LRRC66Q68CR7 880 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 KDM7AQ6ZMT4 941 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 Q6ZPB1 254 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 TMEM26Q6ZUK4 368 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 SLC16A9Q7RTY1 509 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 TRPM8Q7Z2W7 1104 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 ADIPOR2Q86V24 386 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 STX12Q86Y82 276 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 NUDCD3Q8IVD9 361 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 CDKL3Q8IVW4 592 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 MICU2Q8IYU8 434 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 ST13P4Q8IZP2 240 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 GCNT2Q8N0V5 402 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 LRRC75A-AS1Q8N1F1 130 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 FNDC5Q8NAU1 212 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 ACVR1CQ8NER5 493 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR6S1Q8NH40 331 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR52I2Q8NH67 350 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 PNPT1Q8TCS8 783 aaKnown RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 TAS1R2Q8TE23 839 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 GPX8Q8TED1 209 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 PPP4R1Q8TF05 950 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 GIPC3Q8TF64 312 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 SEPT8Q92599 483 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 IGSF8Q969P0 613 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 PHF21AQ96BD5 680 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 MOB3AQ96BX8 217 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZNF524Q96C55 264 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 STAMBPL1Q96FJ0 436 aa2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 OTUB1Q96FW1 271 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P24-202ENST00000615653 C16orf58Q96GQ5 468 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms