RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ING3Q9NXR8 418 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 PEX16Q9Y5Y5 336 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 HEBP2Q9Y5Z4 205 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 PTPRQQ9UMZ3 2332 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 AGAP5A6NIR3 686 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 ATP6V1G2-DDX39BF2Z307 99 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 CCNDBP1O95273 360 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 IFNA14P01570 189 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 AHCYP23526 432 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 OPRD1P41143 372 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 XAF1Q6GPH4 301 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 NUDT13Q86X67 352 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 PROSER1Q86XN7 944 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 ASB12Q8WXK4 309 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 FUBP1Q96AE4 644 aaKnown RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 COL21A1Q96P44 957 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 HDHD2Q9H0R4 259 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 CLEC4MQ9H2X3 399 aaPredicted RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 CUEDC1Q9NWM3 386 aaPredicted RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 DHCR7Q9UBM7 475 aaKnown RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 SNX7Q9UNH6 387 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 DUSP12Q9UNI6 340 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 HCN4Q9Y3Q4 1203 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 TDRD15B5MCY1 1934 aaKnown RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 CDH23Q9H251 3354 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 LOC285095A0A1B0GVY8 99 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 FAM220BPB1ANY3 271 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 ERN1O75460 977 aaKnown RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 TRAPPC6AO75865 159 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 PTTG1O95997 202 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 PDYNP01213 254 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 ALDOCP09972 364 aaKnown RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 SAGP10523 405 aaPredicted RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 HOXC13P31276 330 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 ADRA1AP35348 466 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 SH3BP2P78314 561 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 KLHL12Q53G59 568 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 ZNF678Q5SXM1 525 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 GALNT7Q86SF2 657 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 OR1E3Q8WZA6 343 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 NEIL2Q969S2 332 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 CAMK1GQ96NX5 476 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 REEP1Q9H902 201 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 CRNNQ9UBG3 495 aaPredicted RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 CD300AQ9UGN4 299 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 NEU3Q9UQ49 428 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 RUVBL1Q9Y265 456 aaKnown RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 A0A096LPI6 279 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 MANBAO00462 879 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 KRT33AO76009 404 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 SOX30O94993 753 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 PGRP06401 933 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 MMP2P08253 660 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 C21orf33P30042 268 aaPredicted RBP10.31□□□□□ -0.76
FAM3A-221ENST00000612856 EIF2DP41214 584 aaKnown RBP10.31□□□□□ -0.76
FAM3A-221ENST00000612856 RGS8P57771 180 aaPredicted RBP10.31□□□□□ -0.76
FAM3A-221ENST00000612856 MRPS21P82921 87 aaKnown RBP10.31□□□□□ -0.76
FAM3A-221ENST00000612856 SPIBQ01892 262 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 LCN8Q6JVE9 175 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 SMARCD3Q6STE5 483 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 TMPRSS9Q7Z410 1059 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 ZNF605Q86T29 641 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 CYP4Z1Q86W10 505 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 FUNDC1Q8IVP5 155 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 CSNK1A1LQ8N752 337 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 OR52E1Q8NGJ3 308 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 HUS1BQ8NHY5 278 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 AKAP1Q92667 903 aaKnown RBP eCLIP10.31□□□□□ -0.764e-9■■■■■ 32.4
FAM3A-221ENST00000612856 ELSPBP1Q96BH3 223 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 EGLN2Q96KS0 407 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 ART5Q96L15 291 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 BARD1Q99728 777 aaKnown RBP10.31□□□□□ -0.76
FAM3A-221ENST00000612856 ARHGAP9Q9BRR9 750 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 OR51E2Q9H255 320 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 ARRDC1-AS1Q9H2J1 176 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 NECTIN3Q9NQS3 549 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 DNAJB9Q9UBS3 223 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 MEIOCA2RUB1 952 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 RPLP0P05388 317 aaKnown RBP10.31□□□□□ -0.76
FAM3A-221ENST00000612856 CTSLP07711 333 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 PRKAR1AP10644 381 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 SSTR4P31391 388 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 RABIFP47224 123 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 RAB28P51157 221 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 ADPRHP54922 357 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 YBX1P67809 324 aaKnown RBP10.31□□□□□ -0.76
FAM3A-221ENST00000612856 SHC2P98077 582 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 CDK5R2Q13319 367 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 FXNQ16595 210 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 ZSWIM7Q19AV6 140 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 CTU2Q2VPK5 515 aaKnown RBP10.31□□□□□ -0.76
FAM3A-221ENST00000612856 UNC50Q53HI1 259 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 TECRLQ5HYJ1 363 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 FIGLAQ6QHK4 219 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 ZNF551Q7Z340 670 aaPredicted RBP10.31□□□□□ -0.76
FAM3A-221ENST00000612856 IQCHQ86VS3 1027 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 ZSWIM9Q86XI8 627 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 CAMKVQ8NCB2 501 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 TMEM203Q969S6 136 aa10.31□□□□□ -0.76
FAM3A-221ENST00000612856 RGMAQ96B86 450 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms