RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	MAP4K5	Q9Y4K4	846 aa		13.16	□□□□□ -0.3
COPS7B-223	ENST00000611614	OR52A4P	A6NMU1	304 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	METTL12	A8MUP2	240 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	C10orf142	B7Z368	130 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	IFNA14	P01570	189 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	CD27	P26842	260 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	AK4	P27144	223 aa	Predicted RBP	13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	TEK	Q02763	1124 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	PRKCD	Q05655	676 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	MAPK11	Q15759	364 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	RPE65	Q16518	533 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	SMN1	Q16637	294 aa	Known RBP	13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	SLC5A12	Q1EHB4	618 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	SLC36A4	Q6YBV0	504 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	KBTBD8	Q8NFY9	601 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	OR5AK3P	Q8NH89	298 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	MYDGF	Q969H8	173 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	PELI2	Q9HAT8	420 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	THSD1	Q9NS62	852 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	ASNA1	O43681	348 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	AIRE	O43918	545 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	WBP4	O75554	376 aa	Known RBP	13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	CTSE	P14091	401 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	SOAT1	P35610	550 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	RAB28	P51157	221 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	CRB2	Q5IJ48	1285 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	ATAD3B	Q5T9A4	648 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	WASH2P	Q6VEQ5	465 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	C17orf64	Q86WR6	236 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	DEFB119	Q8N690	84 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	OR4C15	Q8NGM1	316 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	FEV	Q99581	238 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	ACAT2	Q9BWD1	397 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	SORBS1	Q9BX66	1292 aa	Known RBP	13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	GSDMC	Q9BYG8	508 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	SLC6A16	Q9GZN6	736 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	RHBG	Q9H310	441 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	WASH6P	Q9NQA3	447 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	MIEF1	Q9NQG6	463 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	RASSF1	Q9NS23	344 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	TAAR2	Q9P1P5	351 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	TBC1D29	Q9UFV1	150 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	ICK	Q9UPZ9	632 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	PCDHGA6	Q9Y5G7	932 aa		13.15	□□□□□ -0.3
COPS7B-223	ENST00000611614	PRR19	A6NJB7	356 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	SNPH	O15079	494 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	PCDHGA12	O60330	932 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	ARAF	P10398	606 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	ERG	P11308	486 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	ITGA2	P17301	1181 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	NAT1	P18440	290 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	TNFRSF1B	P20333	461 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	UQCRC2	P22695	453 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	CTSK	P43235	329 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	ENTHD1	Q8IYW4	607 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	OR10G2	Q8NGC3	310 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	APH1B	Q8WW43	257 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	UBE2F	Q969M7	185 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	SLC6A18	Q96N87	628 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	MIR1-1HG	Q9H1L0	117 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	ABCB10	Q9NRK6	738 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	TMEM184C	Q9NVA4	438 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	ANGPT4	Q9Y264	503 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	ANKDD1B	A6NHY2	528 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	SEMA3D	O95025	777 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	ANXA8	P13928	327 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	CXCR2	P25025	360 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	OR1E2	P47887	323 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	SPIB	Q01892	262 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	P3H2	Q8IVL5	708 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	SLC30A8	Q8IWU4	369 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	TRIM48	Q8IWZ4	208 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	MMP21	Q8N119	569 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	SLC22A18AS	Q8N1D0	253 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	SLC5A8	Q8N695	610 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	POC5	Q8NA72	575 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	PROX1	Q92786	737 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	RPL3L	Q92901	407 aa	Known RBP	13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	KCNC2	Q96PR1	638 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	TAC3	Q9UHF0	121 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	PCOLCE2	Q9UKZ9	415 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	RNF6	Q9Y252	685 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	WBP11	Q9Y2W2	641 aa	Known RBP	13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	ZNF451	Q9Y4E5	1061 aa		13.14	□□□□□ -0.31
COPS7B-223	ENST00000611614	PRAMEF25	A6NGN4	478 aa		13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	PLPP1	O14494	284 aa		13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	DYRK3	O43781	588 aa		13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	SNX4	O95219	450 aa		13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	LCK	P06239	509 aa		13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	F3	P13726	295 aa		13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	ZNF24	P17028	368 aa		13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	CD38	P28907	300 aa		13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	S100A5	P33763	92 aa		13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	GGT2	P36268	569 aa		13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	CDH12	P55289	794 aa		13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	PCBP3	P57721	371 aa	Known RBP	13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	MICA	Q29983	383 aa		13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	TOR1AIP1	Q5JTV8	583 aa		13.13	□□□□□ -0.31
COPS7B-223	ENST00000611614	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms