RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	RHOXF1	Q8NHV9	184 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	OR5M11	Q96RB7	305 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	ZIC5	Q96T25	663 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	CLSTN3	Q9BQT9	956 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	PRR14	Q9BWN1	585 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	RDH8	Q9NYR8	311 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	ITGA3	P26006	1051 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	GDI1	P31150	447 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	TNFSF8	P32971	234 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	BMP8B	P34820	402 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	GRK6	P43250	576 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	SLC36A4	Q6YBV0	504 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571		Q6ZNX1	250 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	BMP8A	Q7Z5Y6	402 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	PARP16	Q8N5Y8	322 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	OR52E4	Q8NGH9	312 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	OR5P2	Q8WZ92	322 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	ECHDC3	Q96DC8	303 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	ZSWIM3	Q96MP5	696 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	QRSL1	Q9H0R6	528 aa	Known RBP	13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	TRIM36	Q9NQ86	728 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	ABCD2	Q9UBJ2	740 aa		13.2	□□□□□ -0.3
MUC1-223	ENST00000611571	PCSK2	P16519	638 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	PSMB5	P28074	263 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	HLA-F	P30511	346 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	LIPA	P38571	399 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	RPA4	Q13156	261 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	PDGFRL	Q15198	375 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	C4orf46	Q504U0	113 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	PLBD1	Q6P4A8	553 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	GJD3	Q8N144	294 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	MOSPD2	Q8NHP6	518 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	PCNP	Q8WW12	178 aa	Known RBP	13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	WBP2	Q969T9	261 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	CNDP2	Q96KP4	475 aa	Known RBP	13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	NDRG2	Q9UN36	371 aa	Known RBP	13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	GLI3	P10071	1580 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	LAMB1	P07942	1786 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571		A0A1W2PQ09	198 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	TAPBP	O15533	448 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	PCDHGA12	O60330	932 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	ITGBL1	O95965	494 aa	Predicted RBP	13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	C6	P13671	934 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	GBX2	P52951	348 aa	Predicted RBP	13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	STEAP3	Q658P3	488 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	SLC25A25	Q6KCM7	469 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	ZC3H14	Q6PJT7	736 aa	Known RBP	13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	NRM	Q8IXM6	262 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	ZNF480	Q8WV37	535 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	BTBD1	Q9H0C5	482 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	ZNF69	Q9UC07	566 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	IFNA6	P05013	189 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	GGT2	P36268	569 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	MAGEA8	P43361	318 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	DSG2	Q14126	1118 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	MBTPS1	Q14703	1052 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	ELOA3B	Q3SY89	546 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	COX20	Q5RI15	118 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	TRAM1L1	Q8N609	369 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	CELF2-AS1	Q8N7Q2	184 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	NUP43	Q8NFH3	380 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	ELOA3	Q8NG57	546 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	ASB11	Q8WXH4	323 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	TCEAL4	Q96EI5	215 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	CDADC1	Q9BWV3	514 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	B3GNT4	Q9C0J1	378 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	CENPM	Q9NSP4	180 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	LHX3	Q9UBR4	397 aa		13.19	□□□□□ -0.3
MUC1-223	ENST00000611571	FAM171A2	A8MVW0	826 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	GFRA2	O00451	464 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	HTR2B	P41595	481 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	FNTB	P49356	437 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	SYPL1	Q16563	259 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	NDUFAF5	Q5TEU4	345 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	METTL4	Q8N3J2	472 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	TEX26	Q8N6G2	289 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	DENND6B	Q8NEG7	585 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	FIBIN	Q8TAL6	211 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	GPER1	Q99527	375 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	NIPSNAP1	Q9BPW8	284 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	STOML2	Q9UJZ1	356 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	SCN7A	Q01118	1682 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	LOC105369274	A0A096LPK9	316 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	FAAH	O00519	579 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	PRL	P01236	227 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	MPC1L	P0DKB6	136 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	ADARB1	P78563	741 aa	Known RBP	13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	ZNF627	Q7L945	461 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	OR4N4	Q8N0Y3	316 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	THEM6	Q8WUY1	208 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	BTNL2	Q9UIR0	455 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	MARF1	Q9Y4F3	1742 aa	Known RBP	13.18	□□□□□ -0.3
MUC1-223	ENST00000611571		A0A1W2PRQ8	180 aa		13.18	□□□□□ -0.3
MUC1-223	ENST00000611571	CLDN4	O14493	209 aa		13.18	□□□□□ -0.3

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