RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 TSPAN19P0C672 248 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 LINC00032P0C843 101 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF888P0CJ79 500 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 DUX4L2P0CJ85 424 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 DUX4L3P0CJ86 424 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 DUX4L4P0CJ87 422 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 DUX4L5P0CJ88 424 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 DUX4L6P0CJ89 424 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 DUX4L7P0CJ90 424 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC2A2P11168 524 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FOLR2P14207 255 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CD1DP15813 335 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 NPR1P16066 1061 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CPEP16870 476 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAHP16930 419 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 HOXB9P17482 250 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 MAPK3P27361 379 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CHRNA5P30532 468 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 AKT1P31749 480 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 HNF1BP35680 557 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 RFX3P48380 749 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 NR0B1P51843 470 aaKnown RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 GEMP55040 296 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 PRMT2P55345 433 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 DCDP81605 110 aaKnown RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 HOXC5Q00444 222 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 HHEXQ03014 270 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 LGALS3BPQ08380 585 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SCAPQ12770 1279 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 STX4Q12846 297 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 MLLT11Q13015 90 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 MAD2L1Q13257 205 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CTBP1Q13363 440 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 MTMR1Q13613 665 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 TPBGQ13641 420 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 VEZF1Q14119 521 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FGFBP1Q14512 234 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 OPCMLQ14982 345 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FCN2Q15485 313 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SPHARQ15513 63 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 TESK1Q15569 626 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 STXBP2Q15833 593 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ETFDHQ16134 617 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 MPEG1Q2M385 716 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC25A52Q3SY17 297 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ATP6AP1LQ52LC2 224 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 RAB6CQ53S08 254 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 PYDC2Q56P42 97 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 MFSD14BQ5SR56 506 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 HECTD2Q5U5R9 776 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 MANEALQ5VSG8 457 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 AGBL4Q5VU57 503 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM171A1Q5VUB5 890 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR7E24Q6IFN5 339 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 LIN54Q6MZP7 749 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CDC42EP5Q6NZY7 148 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FUT10Q6P4F1 479 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 MZT2AQ6P582 158 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 NOTUMQ6P988 496 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF549Q6P9A3 640 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CD200R1LQ6Q8B3 271 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 KLHL17Q6TDP4 642 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 C5orf46Q6UWT4 87 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 TMEM207Q6UWW9 146 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ABHD15Q6UXT9 468 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 C3P1Q6ZMU1 363 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 Q6ZSR9 355 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 RAB11FIP2Q7L804 512 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SHFQ7M4L6 423 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 KIAA0907Q7Z7F0 614 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC44A2Q8IWA5 706 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM9CQ8IZT9 166 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 PGBD5Q8N414 524 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC44A3Q8N4M1 653 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM86B1Q8N7N1 296 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 NANOGP1Q8N7R0 232 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 C12orf29Q8N999 325 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM71CQ8NEG0 241 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 PPHLN1Q8NEY8 458 aaKnown RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CDC26Q8NHZ8 85 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FBXO30Q8TB52 745 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 STAG3L4Q8TBR4 150 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SCARB1Q8WTV0 552 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZFPM2Q8WW38 1151 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CLEC4DQ8WXI8 215 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ACOT12Q8WYK0 555 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FATE1Q969F0 183 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM162AQ96A26 154 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 UPRTQ96BW1 309 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ORAI1Q96D31 301 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 MTERF3Q96E29 417 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 PHF21BQ96EK2 531 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF503Q96F45 646 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ATXN7L3BQ96GX2 97 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 C7orf34Q96L11 122 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 COQ10AQ96MF6 247 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ATOH8Q96SQ7 321 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 MAPKAP1Q9BPZ7 522 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms