RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 PLPP1O14494 284 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 TMPRSS11DO60235 418 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 SH3BGRLO75368 114 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 EEDO75530 441 aaKnown RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 TRAPPC6AO75865 159 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 PIAS1O75925 651 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 RCBTB2O95199 551 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 SNX4O95219 450 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 CT62P0C5K7 136 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 NCF1P14598 390 aaPredicted RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 CD1DP15813 335 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 GDF1P27539 372 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 LOXP28300 417 aaPredicted RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 PTPN6P29350 595 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 SSTR4P31391 388 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 BSGP35613 385 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 GMPRP36959 345 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 PTGDSP41222 190 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 MSH2P43246 934 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 PCYT1AP49585 367 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 FBXW4P57775 412 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 IRF8Q02556 426 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 TGM3Q08188 693 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 FUT7Q11130 342 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 DLG1Q12959 904 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 LAPTM5Q13571 262 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 ZNF267Q14586 743 aaPredicted RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 FASTKD3Q14CZ7 662 aaKnown RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 AP5B1Q2VPB7 878 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 WIPI1Q5MNZ9 446 aaPredicted RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 TBCELQ5QJ74 424 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 KHDRBS2Q5VWX1 349 aaKnown RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 TIGD3Q6B0B8 471 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 DESI1Q6ICB0 168 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 TMEM81Q6P7N7 255 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 PLXDC2Q6UX71 529 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 C22orf34Q6ZV56 151 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 GPR180Q86V85 440 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 GPSM1Q86YR5 675 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 PM20D2Q8IYS1 436 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 TCAIMQ8N3R3 496 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 ZCCHC7Q8N3Z6 543 aaKnown RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 LIX1Q8N485 282 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 PDPRQ8NCN5 879 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 SPATA3Q8NHX4 192 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 PPP1R14CQ8TAE6 165 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 GRK7Q8WTQ7 553 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 NUDT8Q8WV74 236 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 DIO2Q92813 273 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 ABTB1Q969K4 478 aaPredicted RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 ISL2Q96A47 359 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 CTHRC1Q96CG8 243 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 HSPBAP1Q96EW2 488 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 LRRC46Q96FV0 321 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 CMTM7Q96FZ5 175 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 CFAP36Q96G28 342 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 VPS39Q96JC1 886 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 ART5Q96L15 291 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 MARK4Q96L34 752 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 ZNF597Q96LX8 424 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 JSRP1Q96MG2 331 aaPredicted RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 RILPQ96NA2 401 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 TRIB1Q96RU8 372 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 SECISBP2Q96T21 854 aaKnown RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 TUBA1CQ9BQE3 449 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 RBM24Q9BX46 236 aaKnown RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 CD244Q9BZW8 370 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 PHACTR1Q9C0D0 580 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 DDX47Q9H0S4 455 aaKnown RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 RHOJQ9H4E5 214 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 DDX31Q9H8H2 851 aaKnown RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 COPS7BQ9H9Q2 264 aaPredicted RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 CAB39LQ9H9S4 337 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 CXorf21Q9HAI6 301 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 PPANQ9NQ55 473 aaKnown RBP5.57□□□□□ -1.52
VRK3-220ENST00000600259 GALNT8Q9NY28 637 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 CAMK2AQ9UQM7 478 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 C15orf41Q9Y2V0 281 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 TSC22D4Q9Y3Q8 395 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 JRKLQ9Y4A0 524 aa5.57□□□□□ -1.52
VRK3-220ENST00000600259 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 A0A0A6YYD5 115 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 IQANK1A0A1B0GTG1 560 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 C2orf92A0A1B0GVN3 265 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 SH3D21A4FU49 640 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 GLOD5A6NK44 160 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 FAM171A2A8MVW0 826 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 B4DXG7 233 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 EEF1E1-BLOC1S5C9J1V9 151 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 PGRMC1O00264 195 aaKnown RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 PGRMC2O15173 223 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 PHGDHO43175 533 aaKnown RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 ARHGEF9O43307 516 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 CTIFO43310 598 aaKnown RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 EEF1E1O43324 174 aaKnown RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 TNFSF13O75888 250 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 AIFM1O95831 613 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 ACTL6AO96019 429 aa5.56□□□□□ -1.52
VRK3-220ENST00000600259 ABCB1P08183 1280 aaPredicted RBP5.56□□□□□ -1.52
VRK3-220ENST00000600259 SLC35E2BP0CK96 405 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms