RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 IL20RBQ6UXL0 311 aa19.52■□□□□ 0.72
PNKP-209ENST00000596726 MDGA2Q7Z553 956 aa19.52■□□□□ 0.72
PNKP-209ENST00000596726 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.52■□□□□ 0.72
PNKP-209ENST00000596726 HOMEZQ8IX15 550 aa19.52■□□□□ 0.72
PNKP-209ENST00000596726 GALNT12Q8IXK2 581 aa19.52■□□□□ 0.72
PNKP-209ENST00000596726 FAM98AQ8NCA5 519 aaKnown RBP19.52■□□□□ 0.72
PNKP-209ENST00000596726 FAM76AQ8TAV0 307 aa19.52■□□□□ 0.72
PNKP-209ENST00000596726 PRR7Q8TB68 274 aa19.52■□□□□ 0.72
PNKP-209ENST00000596726 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.52■□□□□ 0.72
PNKP-209ENST00000596726 KLHL29Q96CT2 875 aa19.52■□□□□ 0.72
PNKP-209ENST00000596726 PGM2Q96G03 612 aa19.52■□□□□ 0.72
PNKP-209ENST00000596726 EBPLQ9BY08 206 aa19.52■□□□□ 0.72
PNKP-209ENST00000596726 TUBB1Q9H4B7 451 aa19.52■□□□□ 0.72
PNKP-209ENST00000596726 RYDENQ9NUL5 291 aaKnown RBP19.52■□□□□ 0.72
PNKP-209ENST00000596726 HPF1Q9NWY4 346 aa19.52■□□□□ 0.72
PNKP-209ENST00000596726 SLC28A1O00337 649 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 WISP2O76076 250 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 NADKO95544 446 aaPredicted RBP19.51■□□□□ 0.71
PNKP-209ENST00000596726 ANXA4P09525 319 aaPredicted RBP19.51■□□□□ 0.71
PNKP-209ENST00000596726 S1PR1P21453 382 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 NT5EP21589 574 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 SSTR4P31391 388 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 ARRB2P32121 409 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 SOX18P35713 384 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 SERPINB5P36952 375 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 FEN1P39748 380 aaKnown RBP19.51■□□□□ 0.71
PNKP-209ENST00000596726 ALDH9A1P49189 494 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 MAP4K2Q12851 820 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 HEPACAMQ14CZ8 416 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 EBPQ15125 230 aaKnown RBP19.51■□□□□ 0.71
PNKP-209ENST00000596726 PRICKLE4Q2TBC4 344 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 UGT3A2Q3SY77 523 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 LYPD8Q6UX82 237 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 Q6ZSR9 355 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 ZCCHC23Q6ZST2 131 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 SLC29A4Q7RTT9 530 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 SLC15A4Q8N697 577 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 ZNF615Q8N8J6 731 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 WWTR1Q9GZV5 400 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 TIMMDC1Q9NPL8 285 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 ZNF639Q9UID6 485 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 ERVK-11Q9UQG0 969 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 DNAJC15Q9Y5T4 150 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 PTGDR2Q9Y5Y4 395 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 ACTL7BQ9Y614 415 aa19.51■□□□□ 0.71
PNKP-209ENST00000596726 SEMA7AO75326 666 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 ERLIN1O75477 346 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 ZNF763Q0D2J5 394 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 BEND6Q5SZJ8 279 aaPredicted RBP19.5■□□□□ 0.71
PNKP-209ENST00000596726 OPN5Q6U736 354 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 SULF2Q8IWU5 870 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 CLYBLQ8N0X4 340 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 CPSF7Q8N684 471 aaKnown RBP19.5■□□□□ 0.71
PNKP-209ENST00000596726 ZNF441Q8N8Z8 693 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 OR7G1Q8NGA0 311 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 CTHRC1Q96CG8 243 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 OR10A5Q9H207 317 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 EML4Q9HC35 981 aaKnown RBP19.5■□□□□ 0.71
PNKP-209ENST00000596726 MAT2BQ9NZL9 334 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 EHD3Q9NZN3 535 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 UTS2RQ9UKP6 389 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 WBP11Q9Y2W2 641 aaKnown RBP19.5■□□□□ 0.71
PNKP-209ENST00000596726 TRAF6Q9Y4K3 522 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 ZNF780BQ9Y6R6 833 aa19.5■□□□□ 0.71
PNKP-209ENST00000596726 KLRC4-KLRK1H3BQV0 150 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 RGS14O43566 566 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 SERPINB4P48594 390 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 ALDH6A1Q02252 535 aaKnown RBP19.49■□□□□ 0.71
PNKP-209ENST00000596726 CEBPEQ15744 281 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 ZNF791Q3KP31 576 aaPredicted RBP19.49■□□□□ 0.71
PNKP-209ENST00000596726 RNFT1Q5M7Z0 435 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 FAM71E1Q6IPT2 247 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 NOXRED1Q6NXP6 359 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 FAM180BQ6P0A1 224 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 FAM111BQ6SJ93 734 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 SIAH3Q8IW03 269 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 GOLM1Q8NBJ4 401 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 POGLUT1Q8NBL1 392 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 PSD4Q8NDX1 1056 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 OR2T11Q8NH01 316 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 SLC22A8Q8TCC7 542 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 FCRL1Q96LA6 429 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 SGCZQ96LD1 299 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 CENPHQ9H3R5 247 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 FIS1Q9Y3D6 152 aa19.49■□□□□ 0.71
PNKP-209ENST00000596726 PTPN13Q12923 2485 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 GTF3C1Q12789 2109 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 TMEM233B4DJY2 109 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 TM9SF1O15321 606 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 PEX1O43933 1283 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 CHEK2O96017 543 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 DHRS4L1P0CG22 281 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 MEOX1P50221 254 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 KCNK10P57789 538 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 MPP2Q14168 576 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 C6orf163Q5TEZ5 329 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 CES4AQ5XG92 561 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 RTL4Q6ZR62 310 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 NUDCD3Q8IVD9 361 aa19.48■□□□□ 0.71
PNKP-209ENST00000596726 SAMD14Q8IZD0 417 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms