RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ZFAND2BQ8WV99 257 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 XAGE5Q8WWM1 108 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 IPCEF1Q8WWN9 437 aaPredicted RBP9.8□□□□□ -0.84
VPS25-203ENST00000589520 JPH3Q8WXH2 748 aaPredicted RBP9.8□□□□□ -0.84
VPS25-203ENST00000589520 ELP4Q96EB1 424 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 CNRIP1Q96F85 164 aaPredicted RBP9.8□□□□□ -0.84
VPS25-203ENST00000589520 SPACA7Q96KW9 195 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 C10orf90Q96M02 699 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 PITX2Q99697 317 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 ACTRT3Q9BYD9 372 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 RBM38Q9H0Z9 239 aaKnown RBP9.8□□□□□ -0.84
VPS25-203ENST00000589520 ADNPQ9H2P0 1102 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 EVA1AQ9H8M9 152 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 VNN3Q9NY84 501 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 PTTG2Q9NZH5 202 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 KCMF1Q9P0J7 381 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 SEC14L3Q9UDX4 400 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 EPHA6Q9UF33 1036 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 RSL24D1Q9UHA3 163 aaKnown RBP9.8□□□□□ -0.84
VPS25-203ENST00000589520 KCND3Q9UK17 655 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 FBXL21Q9UKT6 434 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 TMCC3Q9ULS5 477 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 CA14Q9ULX7 337 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 DOLKQ9UPQ8 538 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 SLC9A8Q9Y2E8 581 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 PCDHGA8Q9Y5G5 932 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 SPTBN4Q9H254 2564 aa9.8□□□□□ -0.84
VPS25-203ENST00000589520 A0A087WV62 115 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 CCDC160A6NGH7 325 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 E9PQ18 207 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 AXIN1O15169 862 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 PGRMC2O15173 223 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 PPM1DO15297 605 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 MPZL2O60487 215 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 CTSVO60911 334 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 CCNB2O95067 398 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 GADD45GO95257 159 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 CLIC3O95833 236 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 OR12D1P0DN82 309 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 CD247P20963 164 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 EEF1B2P24534 225 aaKnown RBP9.79□□□□□ -0.84
VPS25-203ENST00000589520 IFNA8P32881 189 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 LIMS1P48059 325 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 XKP51811 444 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 TFF2Q03403 129 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 CD47Q08722 323 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 CDK5R2Q13319 367 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 TCEA2Q15560 299 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.79□□□□□ -0.84
VPS25-203ENST00000589520 MLIPQ5VWP3 458 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 C18orf63Q68DL7 685 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 OGFOD3Q6PK18 319 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 MAMSTRQ6ZN01 415 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 UBALD2Q8IYN6 164 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 CARFQ8N187 725 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 PARP8Q8N3A8 854 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 CHDHQ8NE62 594 aaPredicted RBP9.79□□□□□ -0.84
VPS25-203ENST00000589520 NUP43Q8NFH3 380 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 PHF10Q8WUB8 498 aaKnown RBP9.79□□□□□ -0.84
VPS25-203ENST00000589520 CLDN23Q96B33 292 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 TCTN2Q96GX1 697 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 HRASLS5Q96KN8 279 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 SLC6A18Q96N87 628 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 TRNT1Q96Q11 434 aaKnown RBP9.79□□□□□ -0.84
VPS25-203ENST00000589520 TREX2Q9BQ50 279 aaPredicted RBP9.79□□□□□ -0.84
VPS25-203ENST00000589520 CCDC3Q9BQI4 270 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 PINK1Q9BXM7 581 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 RAB33BQ9H082 229 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 TCEAL2Q9H3H9 227 aaPredicted RBP9.79□□□□□ -0.84
VPS25-203ENST00000589520 RIBC2Q9H4K1 309 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 CACYBPQ9HB71 228 aaKnown RBP9.79□□□□□ -0.84
VPS25-203ENST00000589520 PAPOLBQ9NRJ5 636 aaKnown RBP9.79□□□□□ -0.84
VPS25-203ENST00000589520 ACER3Q9NUN7 267 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 GIN1Q9NXP7 522 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 TMEM9Q9P0T7 183 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 C5AR2Q9P296 337 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 TRPC4Q9UBN4 977 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 POMT2Q9UKY4 750 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 KLHL20Q9Y2M5 609 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 SH3GLB1Q9Y371 365 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 PCDHGB1Q9Y5G3 927 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 SNX5Q9Y5X3 404 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 CEPT1Q9Y6K0 416 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 CACNA1BQ00975 2339 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 USP34Q70CQ2 3546 aa9.79□□□□□ -0.84
VPS25-203ENST00000589520 C4orf51C9J302 202 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 FAAHO00519 579 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 GALR3O60755 368 aaPredicted RBP9.78□□□□□ -0.84
VPS25-203ENST00000589520 PRAMEF10O60809 474 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 B4GALT2O60909 372 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 DIRAS1O95057 198 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 CPNE6O95741 557 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 AK1P00568 194 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 OPN1SWP03999 348 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 HMGN2P05204 90 aaKnown RBP9.78□□□□□ -0.84
VPS25-203ENST00000589520 HOXB3P14651 431 aaPredicted RBP9.78□□□□□ -0.84
VPS25-203ENST00000589520 PORP16435 677 aaPredicted RBP9.78□□□□□ -0.84
VPS25-203ENST00000589520 PIGAP37287 484 aa9.78□□□□□ -0.84
VPS25-203ENST00000589520 CLK3P49761 638 aaKnown RBP9.78□□□□□ -0.84
VPS25-203ENST00000589520 EPHA4P54764 986 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms