RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 OR1N1Q8NGS0 311 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 BRIX1Q8TDN6 353 aaKnown RBP17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 ELP5Q8TE02 316 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 ZNF721Q8TF20 911 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 VMP1Q96GC9 406 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 SENP5Q96HI0 755 aaPredicted RBP17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 FBXL20Q96IG2 436 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 RILPQ96NA2 401 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 AMDHD1Q96NU7 426 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 NUDT9Q9BW91 350 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 GLIPR2Q9H4G4 154 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 MAT2BQ9NZL9 334 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 TNRC6AQ8NDV7 1962 aaKnown RBP17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 CPAMD8Q8IZJ3 1885 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 BSNQ9UPA5 3926 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 TRBV11-1A0A0K0K1C0 115 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 C9JVG2 144 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 CEACAM4O75871 244 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 EFNA1P20827 205 aaPredicted RBP17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 IL12AP29459 219 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 MPIP34949 423 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 SOX18P35713 384 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 ARFIP2P53365 341 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 MRPS35P82673 323 aaKnown RBP17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 RHDQ02161 417 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 MGAT2Q10469 447 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 RPS6KA2Q15349 733 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 C6orf163Q5TEZ5 329 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 CAMKMTQ7Z624 323 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 SIRT6Q8N6T7 355 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 PSMF1Q92530 271 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 COQ8BQ96D53 544 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 ART5Q96L15 291 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 SEMA4CQ9C0C4 833 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 CLMPQ9H6B4 373 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 SDR39U1Q9NRG7 319 aaPredicted RBP17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 GPR83Q9NYM4 423 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 KLHL14Q9P2G3 628 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 MAPRE3Q9UPY8 281 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 CLPSP04118 112 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 IGKV3-11P04433 115 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 FAM87AP0C7U9 286 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 DDX5P17844 614 aaKnown RBP17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 SSTR4P31391 388 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 FRKP42685 505 aaPredicted RBP17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 CLCN2P51788 898 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 CLNS1AP54105 237 aaKnown RBP17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 MYBPC3Q14896 1274 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 PGS1Q32NB8 556 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 ZNF628Q5EBL2 1059 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 ZNF551Q7Z340 670 aaPredicted RBP17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 VWA5B2Q8N398 1253 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 ZNF675Q8TD23 568 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 KAT2AQ92830 837 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 TESCQ96BS2 214 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 PRPF18Q99633 342 aaKnown RBP17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 ARHGAP9Q9BRR9 750 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 FAM107BQ9H098 131 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 ATAD3AQ9NVI7 634 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 COPS7AQ9UBW8 275 aa17.66■□□□□ 0.42
CLPTM1-209ENST00000588855 PRKNO60260 465 aaPredicted RBP17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 PCSK2P16519 638 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 DRD4P21917 467 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 STX1BP61266 288 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 AP2B1P63010 937 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 FUT7Q11130 342 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 MAP4K2Q12851 820 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 HSPB3Q12988 150 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 SPANXN4Q5MJ08 99 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 IRAK1BP1Q5VVH5 260 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 JMJD6Q6NYC1 403 aaPredicted RBP17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 PAOXQ6QHF9 649 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 MIER2Q8N344 545 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 SIMC1Q8NDZ2 872 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 OR9I1Q8NGQ6 314 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 C10orf82Q8WW14 230 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 CTHRC1Q96CG8 243 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 ZBED6CLQ96FA7 236 aaPredicted RBP17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 DUSP26Q9BV47 211 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 BHLHE41Q9C0J9 482 aaPredicted RBP17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 ZNF552Q9H707 407 aaPredicted RBP17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 ANKRA2Q9H9E1 313 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 ZIM2Q9NZV7 527 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 PTGFRNQ9P2B2 879 aa17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 COPG1Q9Y678 874 aaKnown RBP17.65■□□□□ 0.42
CLPTM1-209ENST00000588855 GMNCA6NCL1 334 aa17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 S1PR1P21453 382 aa17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 SLC37A1P57057 533 aa17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 EXOSC7Q15024 291 aaKnown RBP17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 FAM174BQ3ZCQ3 159 aa17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 TRMT12Q53H54 448 aaKnown RBP17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 B3GNTL1Q67FW5 361 aaPredicted RBP17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 FCRLBQ6BAA4 426 aa17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 OR4F3Q6IEY1 312 aa17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 ZFP28Q8NHY6 868 aa17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 SLC25A23Q9BV35 468 aa17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 ACSS1Q9NUB1 689 aaPredicted RBP17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 ZNF639Q9UID6 485 aa17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 LHX6Q9UPM6 363 aa17.64■□□□□ 0.41
CLPTM1-209ENST00000588855 NUP214P35658 2090 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms