RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 PCDHGB4Q9UN71 923 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 EXO1Q9UQ84 846 aaKnown RBP8.46□□□□□ -1.06
CIRBP-218ENST00000588344 GPR45Q9Y5Y3 372 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 SEC16AO15027 2179 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 CHD8Q9HCK8 2581 aa8.46□□□□□ -1.06
CIRBP-218ENST00000588344 MDC1Q14676 2089 aaKnown RBP8.45□□□□□ -1.06
CIRBP-218ENST00000588344 SPTBP11277 2137 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 ACACBO00763 2458 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 ACACAQ13085 2346 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 PRSS51A0A1B0GVH4 220 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 A0A1W2PRB8 838 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 DYTNA2CJ06 578 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 TTC36A6NLP5 189 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 E9PBE3 544 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 RNASET2O00584 256 aaKnown RBP8.45□□□□□ -1.06
CIRBP-218ENST00000588344 PDPK1O15530 556 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 PLOD3O60568 738 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 LRATO95237 230 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 DDAH2O95865 285 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 IGKV3-11P04433 115 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 ADSLP30566 484 aaPredicted RBP8.45□□□□□ -1.06
CIRBP-218ENST00000588344 S100A3P33764 101 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 KIR3DL1P43629 444 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 PGDP52209 483 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 NCBP2P52298 156 aaKnown RBP eCLIP8.45□□□□□ -1.06
CIRBP-218ENST00000588344 POLE2P56282 527 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 DCAF7P61962 342 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 GNGT1P63211 74 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 FUT7Q11130 342 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 CHAF1BQ13112 559 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 ZNF267Q14586 743 aaPredicted RBP8.45□□□□□ -1.06
CIRBP-218ENST00000588344 MEP1AQ16819 746 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 PRICKLE4Q2TBC4 344 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 TCTN3Q6NUS6 607 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 BHLHB9Q6PI77 547 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 ISLR2Q6UXK2 745 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 RNF111Q6ZNA4 994 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 SLC29A4Q7RTT9 530 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 MMP21Q8N119 569 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 ARMC10Q8N2F6 343 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 APCDD1LQ8NCL9 501 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 CLHC1Q8NHS4 586 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 NUBPLQ8TB37 319 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 SLC2A12Q8TD20 617 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 ZNF721Q8TF20 911 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 EXTL1Q92935 676 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 UCN3Q969E3 161 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 NCLNQ969V3 563 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 CTHRC1Q96CG8 243 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 AMDHD1Q96NU7 426 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 SMAD5Q99717 465 aaKnown RBP8.45□□□□□ -1.06
CIRBP-218ENST00000588344 SLC25A23Q9BV35 468 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 DUSP26Q9BV47 211 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 OR8D2Q9GZM6 311 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 CLMPQ9H6B4 373 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 NEUROD4Q9HD90 331 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 TAS2R9Q9NYW1 312 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 STMN3Q9NZ72 180 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 PTGFRNQ9P2B2 879 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 ZNF639Q9UID6 485 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 ZNF451Q9Y4E5 1061 aa8.45□□□□□ -1.06
CIRBP-218ENST00000588344 FAM234BA2RU67 622 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 A6NL46 340 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 FCHO1O14526 889 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 ANKRD28O15084 1053 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 PRAMEF2O60811 474 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 COQ9O75208 318 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 ALDOCP09972 364 aaKnown RBP8.44□□□□□ -1.06
CIRBP-218ENST00000588344 LAMP1P11279 417 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 NCF2P19878 526 aaPredicted RBP8.44□□□□□ -1.06
CIRBP-218ENST00000588344 GPC1P35052 558 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 SLC37A1P57057 533 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 RNF4P78317 190 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 Q0VFX4 171 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 KCNAB2Q13303 367 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 SQLEQ14534 574 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 MPEG1Q2M385 716 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 PGS1Q32NB8 556 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 ZNF628Q5EBL2 1059 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 ABHD17BQ5VST6 288 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 ZCCHC12Q6PEW1 402 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 IGFL2Q6UWQ7 119 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 IGFL3Q6UXB1 125 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 MSANTD1Q6ZTZ1 278 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 RPS19BP1Q86WX3 136 aaKnown RBP8.44□□□□□ -1.06
CIRBP-218ENST00000588344 GPALPP1Q8IXQ4 340 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 SLC15A4Q8N697 577 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 KRTCAP2Q8N6L1 136 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 HORMAD2Q8N7B1 307 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 C17orf47Q8NEP4 570 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 FDCSPQ8NFU4 85 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 OR7A2PQ8NGA2 310 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 RFWD2Q8NHY2 731 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 PSMA8Q8TAA3 256 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 SUN3Q8TAQ9 357 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 TSPEARQ8WU66 669 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 TTC9Q92623 222 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 HAS2Q92819 552 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 TP53INP1Q96A56 240 aa8.44□□□□□ -1.06
CIRBP-218ENST00000588344 MOAP1Q96BY2 351 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms