RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 TMUB1Q9BVT8 246 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 EPB41L4BQ9H329 900 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 DDX31Q9H8H2 851 aaKnown RBP12.99□□□□□ -0.33
ERCC1-205ENST00000587888 WDR41Q9HAD4 459 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 RASSF1Q9NS23 344 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 ST6GALNAC2Q9UJ37 374 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 PCDHGB3Q9Y5G1 929 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 NPFFR2Q9Y5X5 522 aa12.99□□□□□ -0.33
ERCC1-205ENST00000587888 ARHGAP21Q5T5U3 1957 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 A0A0A6YYD5 115 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 OR6C76A6NM76 312 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 SYCE1LA8MT33 242 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 H0YIV9 168 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 DVL2O14641 736 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 TRIM3O75382 744 aaPredicted RBP12.98□□□□□ -0.33
ERCC1-205ENST00000587888 AIFM1O95831 613 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 SLC35E2P0CK97 266 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 PIK3R1P27986 724 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 ARL1P40616 181 aaPredicted RBP12.98□□□□□ -0.33
ERCC1-205ENST00000587888 AGFG1P52594 562 aaKnown RBP12.98□□□□□ -0.33
ERCC1-205ENST00000587888 PPP2R2AP63151 447 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 C2orf54Q08AI8 447 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 SETDB1Q15047 1291 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 TRADDQ15628 312 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 MROH9Q5TGP6 573 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 MRM1Q6IN84 353 aaKnown RBP12.98□□□□□ -0.33
ERCC1-205ENST00000587888 GOLGA7Q7Z5G4 137 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 TGIF2LYQ8IUE0 185 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 NAXEQ8NCW5 288 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 SPATA4Q8NEY3 305 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 NINJ1Q92982 152 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 TP53INP1Q96A56 240 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 REPS1Q96D71 796 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 LRRC46Q96FV0 321 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 RMND5BQ96G75 393 aaPredicted RBP12.98□□□□□ -0.33
ERCC1-205ENST00000587888 ZNF597Q96LX8 424 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 RILPQ96NA2 401 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 GNRHR2Q96P88 292 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 ZNF717Q9BY31 904 aaPredicted RBP12.98□□□□□ -0.33
ERCC1-205ENST00000587888 IPPKQ9H8X2 491 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 GRPEL1Q9HAV7 217 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 PLEKHA6Q9Y2H5 1048 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 SLC6A5Q9Y345 797 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 RNF11Q9Y3C5 154 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 TSC22D4Q9Y3Q8 395 aa12.98□□□□□ -0.33
ERCC1-205ENST00000587888 A0A087X1B8 175 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 ANKRD33BA6NCL7 494 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 CAPN14A8MX76 684 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 IL2RAP01589 272 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 C2P06681 752 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 CT62P0C5K7 136 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 KLK2P20151 261 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 DNASE1P24855 282 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 CEACAM8P31997 349 aaPredicted RBP12.97□□□□□ -0.33
ERCC1-205ENST00000587888 STX2P32856 288 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 GALNSP34059 522 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 MASP1P48740 699 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 ASCL1P50553 236 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 ARFIP1P53367 373 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 ALDH18A1P54886 795 aaKnown RBP12.97□□□□□ -0.33
ERCC1-205ENST00000587888 CRYZQ08257 329 aaKnown RBP12.97□□□□□ -0.33
ERCC1-205ENST00000587888 CUL3Q13618 768 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 GTF2H2Q13888 395 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 FAM83EQ2M2I3 478 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 ACSF3Q4G176 576 aaPredicted RBP12.97□□□□□ -0.33
ERCC1-205ENST00000587888 TBCELQ5QJ74 424 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 FBXW10Q5XX13 1052 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 GTF2H2CQ6P1K8 395 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 PACS2Q86VP3 889 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 CDC20BQ86Y33 519 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 PRR22Q8IZ63 422 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 CENPLQ8N0S6 344 aaPredicted RBP12.97□□□□□ -0.33
ERCC1-205ENST00000587888 ZNF441Q8N8Z8 693 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 RHEBL1Q8TAI7 183 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 FBXO25Q8TCJ0 367 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 SPPL2AQ8TCT8 520 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 RNASE6Q93091 150 aaKnown RBP12.97□□□□□ -0.33
ERCC1-205ENST00000587888 ATP6V1E2Q96A05 226 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 POM121Q96HA1 1249 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 CDK15Q96Q40 435 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 TRIB1Q96RU8 372 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 ANGPTL4Q9BY76 406 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 OR10A5Q9H207 317 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 CXXC4Q9H2H0 198 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 CXorf21Q9HAI6 301 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 TEX10Q9NXF1 929 aaPredicted RBP12.97□□□□□ -0.33
ERCC1-205ENST00000587888 CPSF2Q9P2I0 782 aaKnown RBP12.97□□□□□ -0.33
ERCC1-205ENST00000587888 EDARQ9UNE0 448 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 CAMK2AQ9UQM7 478 aa12.97□□□□□ -0.33
ERCC1-205ENST00000587888 UTP11Q9Y3A2 253 aaKnown RBP12.97□□□□□ -0.33
ERCC1-205ENST00000587888 PRRC2AP48634 2157 aaKnown RBP12.96□□□□□ -0.33
ERCC1-205ENST00000587888 A6NNC1 897 aa12.96□□□□□ -0.33
ERCC1-205ENST00000587888 SNX4O95219 450 aa12.96□□□□□ -0.33
ERCC1-205ENST00000587888 SIX3O95343 332 aaPredicted RBP12.96□□□□□ -0.33
ERCC1-205ENST00000587888 KLK1P06870 262 aa12.96□□□□□ -0.33
ERCC1-205ENST00000587888 FREM3P0C091 2139 aa12.96□□□□□ -0.33
ERCC1-205ENST00000587888 TIMP3P35625 211 aa12.96□□□□□ -0.33
ERCC1-205ENST00000587888 PEX19P40855 299 aa12.96□□□□□ -0.33
ERCC1-205ENST00000587888 CASP3P42574 277 aa12.96□□□□□ -0.33
ERCC1-205ENST00000587888 XKP51811 444 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms