RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 ANKRD17O75179 2603 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MAP1BP46821 2468 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ILVBLA1L0T0 632 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM149AA5PLN7 773 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PCP4L1A6NKN8 68 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 H3BMM5 538 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PTGESO14684 152 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MDM4O15151 490 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 LINC01565O15544 149 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CACNG3O60359 315 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MTX2O75431 263 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CSDE1O75534 798 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CIB2O75838 187 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 GSTA1P08263 222 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF30P17039 623 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 NAGAP17050 411 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 EIF2S3P41091 472 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CD86P42081 329 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 NSFP46459 744 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CTSCP53634 463 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 UBASH3AP57075 661 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 OSTNP61366 133 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 TFAMQ00059 246 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CAV1Q03135 178 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CUL3Q13618 768 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CCDC14Q49A88 953 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 FNBP1LQ5T0N5 605 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 OR6B2Q6IFH4 312 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 KLC3Q6P597 504 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 C9orf47Q6ZRZ4 202 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ABI3BPQ7Z7G0 1075 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PATL1Q86TB9 770 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MISPQ8IVT2 679 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 LGI2Q8N0V4 545 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 LSMEM2Q8N112 164 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 UBL4BQ8N7F7 174 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ARL14EPQ8N8R7 260 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 OR10S1Q8NGN2 331 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 C9orf43Q8TAL5 461 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 HMGCLL1Q8TB92 370 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 GPT2Q8TD30 523 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CORO2AQ92828 525 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 FBXO32Q969P5 355 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 TRIM44Q96DX7 344 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF514Q96K75 400 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CNOT6LQ96LI5 555 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PLIN2Q99541 437 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 TUBGCP2Q9BSJ2 902 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CNPY3Q9BT09 278 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 NAT9Q9BTE0 207 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC39A8Q9C0K1 460 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 C6orf106Q9H6K1 298 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM231Q9H6L2 316 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SRD5A3Q9H8P0 318 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 KRCC1Q9NPI7 259 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SPASTQ9UBP0 616 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PADI1Q9ULC6 663 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 FZD10Q9ULW2 581 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 RPH3AQ9Y2J0 694 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PCDHGA1Q9Y5H4 931 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 DDX49Q9Y6V7 483 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 R4GN57 208 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ZDBF2Q9HCK1 2354 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 TRBV2A0A0J9YWF9 115 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 C2orf92A0A1B0GVN3 265 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SDR42E2A6NKP2 422 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 C2CD4BA6NLJ0 364 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SIGLEC16A6NMB1 481 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 OR5K4A6NMS3 321 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 F5H5T6 163 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 EDIL3O43854 480 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SNX3O60493 162 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 LCA5LO95447 670 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 EPOP01588 193 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 IGLV3-27P01718 113 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 UGT2B4P06133 528 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MYZAPP0CAP1 466 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PRLRP16471 622 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CKMT2P17540 419 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 JAK1P23458 1154 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 EPHA2P29317 976 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC1A3P43003 542 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 KHKP50053 298 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 UCNP55089 124 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CASP9P55211 416 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ZXDBP98169 803 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC34A1Q06495 639 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 EIF3IQ13347 325 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 NAB1Q13506 487 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 RAPSNQ13702 412 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ENPP2Q13822 863 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 VEZF1Q14119 521 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PRPSAP1Q14558 356 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MELKQ14680 651 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 NFATC4Q14934 902 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ZMYND11Q15326 602 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SMTNL2Q2TAL5 461 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 GCNT6Q5T4J0 391 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 C10orf25Q5T742 122 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms