RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CCNG1P51959 295 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 PLGLB1Q02325 96 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 ID2Q02363 134 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 KEAP1Q14145 624 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 CPSF6Q16630 551 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCDC47-206ENST00000584112 MPEG1Q2M385 716 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 GLE1Q53GS7 698 aaKnown RBP10.28□□□□□ -0.76
CCDC47-206ENST00000584112 CMPK2Q5EBM0 449 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 C10orf62Q5T681 223 aaPredicted RBP10.28□□□□□ -0.76
CCDC47-206ENST00000584112 NDUFAF5Q5TEU4 345 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 ARHGAP11AQ6P4F7 1023 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 GK5Q6ZS86 529 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 SLC22A16Q86VW1 577 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 NUDT13Q86X67 352 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 DOLPP1Q86YN1 238 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 CHERPQ8IWX8 916 aaKnown RBP10.28□□□□□ -0.76
CCDC47-206ENST00000584112 ST13P4Q8IZP2 240 aaPredicted RBP10.28□□□□□ -0.76
CCDC47-206ENST00000584112 RNF175Q8N4F7 328 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 PTGR2Q8N8N7 351 aaPredicted RBP10.28□□□□□ -0.76
CCDC47-206ENST00000584112 GOLM1Q8NBJ4 401 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 OR2M7Q8NG81 312 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 NUBPLQ8TB37 319 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 FAM57AQ8TBR7 257 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 SLC22A8Q8TCC7 542 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 ZNF721Q8TF20 911 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 ZNF592Q92610 1267 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 ATP6V1E2Q96A05 226 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 ISL2Q96A47 359 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 SCYL1Q96KG9 808 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 Q96MF0 132 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 PAFAH2Q99487 392 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 SORBS1Q9BX66 1292 aaKnown RBP10.28□□□□□ -0.76
CCDC47-206ENST00000584112 LIN28AQ9H9Z2 209 aaKnown RBP10.28□□□□□ -0.76
CCDC47-206ENST00000584112 WDR41Q9HAD4 459 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 EDARQ9UNE0 448 aa10.28□□□□□ -0.76
CCDC47-206ENST00000584112 A0A0A6YYD5 115 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 A0A1B0GTH9 108 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 SERINC4A6NH21 518 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 LRRC14BA6NHZ5 514 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 STX16-NPEPL1H3BU86 382 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 STX16O14662 325 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 TOXO94900 526 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 SEMA3DO95025 777 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 ETHE1O95571 254 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 P04436 131 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 CTAGE8P0CG41 777 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 NR2F6P10588 404 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 ALOX15P16050 662 aaPredicted RBP10.27□□□□□ -0.77
CCDC47-206ENST00000584112 MAGEA12P43365 314 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 HNRNPH2P55795 449 aaKnown RBP10.27□□□□□ -0.77
CCDC47-206ENST00000584112 PPIAP62937 165 aaKnown RBP10.27□□□□□ -0.77
CCDC47-206ENST00000584112 TBL3Q12788 808 aaKnown RBP10.27□□□□□ -0.77
CCDC47-206ENST00000584112 SNTB1Q13884 538 aaKnown RBP10.27□□□□□ -0.77
CCDC47-206ENST00000584112 SPRED3Q2MJR0 410 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 Q5PR19 223 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 SHEQ5VZ18 495 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 TMEM211Q6ICI0 200 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 CD163Q86VB7 1156 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 CTAGE4Q8IX94 777 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 OR4N5Q8IXE1 308 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 DND1Q8IYX4 353 aaKnown RBP10.27□□□□□ -0.77
CCDC47-206ENST00000584112 PLD6Q8N2A8 252 aaKnown RBP10.27□□□□□ -0.77
CCDC47-206ENST00000584112 SLC15A4Q8N697 577 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 ZNF321PQ8N8H1 164 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 GOT1L1Q8NHS2 421 aaPredicted RBP10.27□□□□□ -0.77
CCDC47-206ENST00000584112 WDR20Q8TBZ3 569 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 IFT81Q8WYA0 676 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 PHF21BQ96EK2 531 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 SENP5Q96HI0 755 aaPredicted RBP10.27□□□□□ -0.77
CCDC47-206ENST00000584112 FBXL20Q96IG2 436 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 DMRTA2Q96SC8 542 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 SERPINI1Q99574 410 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 FAM173AQ9BQD7 235 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 NTMT1Q9BV86 223 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 ZNF717Q9BY31 904 aaPredicted RBP10.27□□□□□ -0.77
CCDC47-206ENST00000584112 NOL11Q9H8H0 719 aaKnown RBP10.27□□□□□ -0.77
CCDC47-206ENST00000584112 DDX31Q9H8H2 851 aaKnown RBP10.27□□□□□ -0.77
CCDC47-206ENST00000584112 PLSCR2Q9NRY7 297 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 RASSF1Q9NS23 344 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 SACM1LQ9NTJ5 587 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 COQ3Q9NZJ6 369 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 XPR1Q9UBH6 696 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 DMGDHQ9UI17 866 aaKnown RBP10.27□□□□□ -0.77
CCDC47-206ENST00000584112 ZNF180Q9UJW8 692 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 RNF11Q9Y3C5 154 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 ATG4BQ9Y4P1 393 aa10.27□□□□□ -0.77
CCDC47-206ENST00000584112 A0A087WUV0 522 aaPredicted RBP10.26□□□□□ -0.77
CCDC47-206ENST00000584112 POC1B-GALNT4F8VUJ3 575 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 KIF2AO00139 706 aaPredicted RBP10.26□□□□□ -0.77
CCDC47-206ENST00000584112 ADAM10O14672 748 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 OR10H2O60403 315 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 GPR75O95800 540 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 IGKV3-11P04433 115 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 FAM58BPP0C7Q3 252 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 CNR1P21554 472 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 GALNSP34059 522 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 BSGP35613 385 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 ASPHQ12797 758 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 IFT88Q13099 833 aa10.26□□□□□ -0.77
CCDC47-206ENST00000584112 ZNF750Q32MQ0 723 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms