RNA–Protein interactions for RNA: ENST00000579451.1

PSMD11-208, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-208	ENST00000579451	LIME1	Q9H400	295 aa		13.92	□□□□□ -0.18
PSMD11-208	ENST00000579451	DDX31	Q9H8H2	851 aa	Known RBP	13.92	□□□□□ -0.18
PSMD11-208	ENST00000579451	GRHL1	Q9NZI5	618 aa		13.92	□□□□□ -0.18
PSMD11-208	ENST00000579451	CRIM1	Q9NZV1	1036 aa		13.92	□□□□□ -0.18
PSMD11-208	ENST00000579451	ANGPTL3	Q9Y5C1	460 aa		13.92	□□□□□ -0.18
PSMD11-208	ENST00000579451	ACAN	P16112	2415 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	FLNA	P21333	2647 aa	Known RBP	13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	C2orf92	A0A1B0GVN3	265 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451		A0A1W2PR48	441 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	GLOD5	A6NK44	160 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	CAPN14	A8MX76	684 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451		H0YIV9	168 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	TP53I11	O14683	189 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	TMPRSS11D	O60235	418 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	UGDH	O60701	494 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	EPPIN	O95925	133 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	FAM58BP	P0C7Q3	252 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	SLC35E2	P0CK97	266 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	NR2F6	P10588	404 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	BMP5	P22003	454 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	TIMP3	P35625	211 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	CRYZ	Q08257	329 aa	Known RBP	13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	CUL3	Q13618	768 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	SETDB1	Q15047	1291 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	RPS6KA2	Q15349	733 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	FBXL19-AS1	Q494R0	122 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	ACSF3	Q4G176	576 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	FLYWCH1	Q4VC44	716 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	TMEM198	Q66K66	360 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	CYP20A1	Q6UW02	462 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	MAATS1	Q7Z4T9	603 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	ZNF441	Q8N8Z8	693 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	TNIP2	Q8NFZ5	429 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	RNASE6	Q93091	150 aa	Known RBP	13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	TP53INP1	Q96A56	240 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	REPS1	Q96D71	796 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	LRRC46	Q96FV0	321 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	RMND5B	Q96G75	393 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	ACTR8	Q9H981	624 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	WDR41	Q9HAD4	459 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	PSD3	Q9NYI0	1048 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	EDAR	Q9UNE0	448 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	ACOT9	Q9Y305	439 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	IKBKG	Q9Y6K9	419 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	MED12L	Q86YW9	2145 aa		13.91	□□□□□ -0.18
PSMD11-208	ENST00000579451	CCDC189	A1A4V9	331 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451		A6NNC1	897 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	RAD51C	O43502	376 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	AIFM1	O95831	613 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	NAB1	Q13506	487 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	CEBPE	Q15744	281 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	POMZP3	Q6PJE2	187 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	LACC1	Q8IV20	430 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	CENPL	Q8N0S6	344 aa	Predicted RBP	13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	WDR20	Q8TBZ3	569 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	FAM222B	Q8WU58	562 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	KCTD4	Q8WVF5	259 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	UCN3	Q969E3	161 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	SECISBP2	Q96T21	854 aa	Known RBP	13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	TIMP4	Q99727	224 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	PRDM14	Q9GZV8	571 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	UBQLN3	Q9H347	655 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	CXorf21	Q9HAI6	301 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	SNX15	Q9NRS6	342 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	MTRF1L	Q9UGC7	380 aa	Known RBP	13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	NPFFR2	Q9Y5X5	522 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	MED12	Q93074	2177 aa		13.9	□□□□□ -0.18
PSMD11-208	ENST00000579451	NAV3	Q8IVL0	2385 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	KDM4E	B2RXH2	506 aa	Predicted RBP	13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	FOXE1	O00358	373 aa	Predicted RBP	13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	TRAPPC6A	O75865	159 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	SNX4	O95219	450 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	IL2RA	P01589	272 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	HPN	P05981	417 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	GFAP	P14136	432 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	KLK2	P20151	261 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	DNASE1	P24855	282 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	SSTR4	P31391	388 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	STX2	P32856	288 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	TMED10	P49755	219 aa	Known RBP	13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	ALDH18A1	P54886	795 aa	Known RBP	13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	WNT3	P56703	355 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	FBXW4	P57775	412 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	PPP2R2A	P63151	447 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	IRF9	Q00978	393 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	GTF2H2	Q13888	395 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.89	□□□□□ -0.19	3e-8	■□□□□ 9.9
PSMD11-208	ENST00000579451	PFKFB4	Q16877	469 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	FAM83E	Q2M2I3	478 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	HLA-DQA1	Q5Y7H0	255 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	BICRAL	Q6AI39	1079 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	OR52E8	Q6IFG1	317 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	GTF2H2C	Q6P1K8	395 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	TMEM64	Q6YI46	380 aa		13.89	□□□□□ -0.19
PSMD11-208	ENST00000579451	CCDC91	Q7Z6B0	441 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms