RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 DUSP15Q9H1R2 295 aaPredicted RBP10.49□□□□□ -0.73
SKA2-204ENST00000578519 ARMC7Q9H6L4 198 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 ERVMER34-1Q9H9K5 563 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 NDUFAF4Q9P032 175 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 ABCG2Q9UNQ0 655 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 PLCL2Q9UPR0 1127 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 IFT52Q9Y366 437 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 GMPPBQ9Y5P6 360 aa10.49□□□□□ -0.73
SKA2-204ENST00000578519 A0A087WV62 115 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 CCDC160A6NGH7 325 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 GLOD5A6NK44 160 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 CLDN4O14493 209 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 PPM1DO15297 605 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 NOL3O60936 208 aaKnown RBP10.48□□□□□ -0.73
SKA2-204ENST00000578519 COQ9O75208 318 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 GCM2O75603 506 aaPredicted RBP10.48□□□□□ -0.73
SKA2-204ENST00000578519 MFN2O95140 757 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 GPR75O95800 540 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 STATHP02808 62 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 OPN1SWP03999 348 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 TFAP2AP05549 437 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 FESP07332 822 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 CCDC159P0C7I6 412 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 SMIM18P0DKX4 95 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 PRKACGP22612 351 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 HOXA6P31267 233 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 HLCSP50747 726 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 IST1P53990 364 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 VSX2P58304 361 aaPredicted RBP10.48□□□□□ -0.73
SKA2-204ENST00000578519 CXCR4P61073 352 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 C14orf28Q4W4Y0 310 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 COLEC12Q5KU26 742 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 RNF220Q5VTB9 566 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 ZNF691Q5VV52 312 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 FAHD1Q6P587 224 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 C16orf62Q7Z3J2 963 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 GPR141Q7Z602 305 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 TSPYL5Q86VY4 417 aaPredicted RBP10.48□□□□□ -0.73
SKA2-204ENST00000578519 ALDH16A1Q8IZ83 802 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 FAM160A2Q8N612 972 aaPredicted RBP10.48□□□□□ -0.73
SKA2-204ENST00000578519 OR10G2Q8NGC3 310 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 OR10Q1Q8NGQ4 319 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 PATE1Q8WXA2 126 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 CNRIP1Q96F85 164 aaPredicted RBP10.48□□□□□ -0.73
SKA2-204ENST00000578519 HSPA12BQ96MM6 686 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 ZNF681Q96N22 645 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 COL21A1Q96P44 957 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 MS4A4EQ96PG1 132 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 TRNT1Q96Q11 434 aaKnown RBP10.48□□□□□ -0.73
SKA2-204ENST00000578519 TUBA1CQ9BQE3 449 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 PSD2Q9BQI7 771 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 PELOQ9BRX2 385 aaKnown RBP10.48□□□□□ -0.73
SKA2-204ENST00000578519 PINK1Q9BXM7 581 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 ADNPQ9H2P0 1102 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 RIBC2Q9H4K1 309 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 PDE7BQ9NP56 450 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 CCNB1IP1Q9NPC3 277 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 PAPOLBQ9NRJ5 636 aaKnown RBP10.48□□□□□ -0.73
SKA2-204ENST00000578519 KCMF1Q9P0J7 381 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 NTMQ9P121 344 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 C5AR2Q9P296 337 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 SUSD2Q9UGT4 822 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 SH3GLB1Q9Y371 365 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 HCN4Q9Y3Q4 1203 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 TESMINQ9Y4I5 508 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 GPC6Q9Y625 555 aaPredicted RBP10.48□□□□□ -0.73
SKA2-204ENST00000578519 ATG2BQ96BY7 2078 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 F5P12259 2224 aa10.48□□□□□ -0.73
SKA2-204ENST00000578519 SYNDIG1LA6NDD5 238 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 TLCD2A6NGC4 264 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 TRIM64CA6NLI5 447 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 TTC36A6NLP5 189 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 SYT5O00445 386 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 BCAT2O15382 392 aaPredicted RBP10.47□□□□□ -0.73
SKA2-204ENST00000578519 MPZL2O60487 215 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 GALR3O60755 368 aaPredicted RBP10.47□□□□□ -0.73
SKA2-204ENST00000578519 WNT1P04628 370 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 ALPPP05187 535 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 HMGN2P05204 90 aaKnown RBP10.47□□□□□ -0.73
SKA2-204ENST00000578519 C8orf89P0DMQ9 161 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 RNH1P13489 461 aaKnown RBP10.47□□□□□ -0.73
SKA2-204ENST00000578519 CPMP14384 443 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 TYRP1P17643 537 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 IFNGR2P38484 337 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 MLLT3P42568 568 aaPredicted RBP10.47□□□□□ -0.73
SKA2-204ENST00000578519 XCR1P46094 333 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 CAPZBP47756 277 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 AVPR1BP47901 424 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 ARL4DP49703 201 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 DAPP51397 102 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 CASP9P55211 416 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 CDH12P55289 794 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 IL5RAQ01344 420 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 MLLT1Q03111 559 aaPredicted RBP10.47□□□□□ -0.73
SKA2-204ENST00000578519 ZP2Q05996 745 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 NPRL3Q12980 569 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 RUNX2Q13950 521 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 FAM53BQ14153 422 aa10.47□□□□□ -0.73
SKA2-204ENST00000578519 LASP1Q14847 261 aaKnown RBP10.47□□□□□ -0.73
SKA2-204ENST00000578519 FAM214AQ32MH5 1076 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms