RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 FOXD4Q12950 439 aaPredicted RBP13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 SETDB1Q15047 1291 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 NSUN5P2Q63ZY6 315 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 ADGRD1Q6QNK2 874 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 LYPD8Q6UX82 237 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 BIVMQ86UB2 503 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 GALNT12Q8IXK2 581 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 RELL2Q8NC24 303 aaPredicted RBP13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 HUS1BQ8NHY5 278 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 UBXN10Q96LJ8 280 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 ZFP3Q96NJ6 502 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 PRDM14Q9GZV8 571 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 ACBD3Q9H3P7 528 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 SAYSD1Q9NPB0 183 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 RNF14Q9UBS8 474 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 CBLCQ9ULV8 474 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 CFL2Q9Y281 166 aa13.04□□□□□ -0.32
SMARCD2-205ENST00000577686 CD8B2A6NJW9 211 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 FAM171A2A8MVW0 826 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 EEF1E1-BLOC1S5C9J1V9 151 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 PLPP1O14494 284 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 EEF1E1O43324 174 aaKnown RBP13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 TRIM3O75382 744 aaPredicted RBP13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 ERN1O75460 977 aaKnown RBP13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 IL18BPO95998 194 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 HPNP05981 417 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 FAM58BPP0C7Q3 252 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 GFAPP14136 432 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 EPORP19235 508 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 CTSSP25774 331 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 PIK3R1P27986 724 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 STX2P32856 288 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 CDK9P50750 372 aaKnown RBP13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 EEF1A1P68104 462 aaKnown RBP13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 NAB1Q13506 487 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 CUL3Q13618 768 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 FAM83EQ2M2I3 478 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 DEFB113Q30KQ7 82 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 EEF1A1P5Q5VTE0 462 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 C18orf63Q68DL7 685 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 TEX9Q8N6V9 391 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 TNIP2Q8NFZ5 429 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 SPPL2AQ8TCT8 520 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 RILPQ96NA2 401 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 NEUROD4Q9HD90 331 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 C15orf41Q9Y2V0 281 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 TNPO3Q9Y5L0 923 aaKnown RBP13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 NPFFR2Q9Y5X5 522 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 SAR1BQ9Y6B6 198 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 ZNF407Q9C0G0 2248 aa13.03□□□□□ -0.32
SMARCD2-205ENST00000577686 SPG11Q96JI7 2443 aa13.02□□□□□ -0.32
SMARCD2-205ENST00000577686 A0A087X1B8 175 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 FAM159BA6NKW6 160 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 H0YIV9 168 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 GUCY1B2O75343 617 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 ACTL6AO96019 429 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 CYP4B1P13584 511 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 SSTR1P30872 391 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 ARL1P40616 181 aaPredicted RBP13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 HNRNPH2P55795 449 aaKnown RBP13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 RPS13P62277 151 aaKnown RBP13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 SNTB1Q13884 538 aaKnown RBP13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 NHSL2Q5HYW2 709 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 C10orf62Q5T681 223 aaPredicted RBP13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 KLC3Q6P597 504 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 C3orf62Q6ZUJ4 267 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 PAGE2Q7Z2X7 111 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 C17orf47Q8NEP4 570 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 OR7G1Q8NGA0 311 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 NTNG2Q96CW9 530 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 TMEM41AQ96HV5 264 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 MTERF1Q99551 399 aaKnown RBP13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 SERPINI1Q99574 410 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 TIMP4Q99727 224 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 NAPGQ99747 312 aaPredicted RBP13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 SORBS1Q9BX66 1292 aaKnown RBP13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 ANGPTL4Q9BY76 406 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 DDX31Q9H8H2 851 aaKnown RBP13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 METTL7AQ9H8H3 244 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 CALHM2Q9HA72 323 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 SMYD2Q9NRG4 433 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 PSD3Q9NYI0 1048 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 AHSPQ9NZD4 102 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 WHRNQ9P202 907 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 ACOT9Q9Y305 439 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 SNX24Q9Y343 169 aa13.02□□□□□ -0.33
SMARCD2-205ENST00000577686 TCRBV9S1A1TA0A576 114 aa13.01□□□□□ -0.33
SMARCD2-205ENST00000577686 MBD3L4A6NDZ8 208 aaPredicted RBP13.01□□□□□ -0.33
SMARCD2-205ENST00000577686 MBD3L3A6NE82 208 aaPredicted RBP13.01□□□□□ -0.33
SMARCD2-205ENST00000577686 FAM187AA6NFU0 413 aa13.01□□□□□ -0.33
SMARCD2-205ENST00000577686 MBD3L5A6NJ08 208 aaPredicted RBP13.01□□□□□ -0.33
SMARCD2-205ENST00000577686 UBXN8O00124 270 aa13.01□□□□□ -0.33
SMARCD2-205ENST00000577686 HRKO00198 91 aa13.01□□□□□ -0.33
SMARCD2-205ENST00000577686 CASKO14936 926 aa13.01□□□□□ -0.33
SMARCD2-205ENST00000577686 SEMA3DO95025 777 aa13.01□□□□□ -0.33
SMARCD2-205ENST00000577686 LRATO95237 230 aa13.01□□□□□ -0.33
SMARCD2-205ENST00000577686 NAGAP17050 411 aa13.01□□□□□ -0.33
SMARCD2-205ENST00000577686 ADSLP30566 484 aaPredicted RBP13.01□□□□□ -0.33
SMARCD2-205ENST00000577686 CPA2P48052 419 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms