RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 TRPV3Q8NET8 790 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 IPMKQ8NFU5 416 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 OR1B1Q8NGR6 318 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 FBXO25Q8TCJ0 367 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 CD99L2Q8TCZ2 262 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 ATP8B4Q8TF62 1192 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 SELENOMQ8WWX9 145 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 LIPHQ8WWY8 451 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 HIST1H2ACQ93077 130 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 TOMM40LQ969M1 308 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 RPGRIP1Q96KN7 1286 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 CXorf58Q96LI9 332 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 RAB40CQ96S21 281 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 COQ7Q99807 217 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 EGLN1Q9GZT9 426 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 ZNF665Q9H7R5 613 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 HEXA-AS1Q9H8Q6 139 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 PRMT8Q9NR22 394 aaPredicted RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 POLE3Q9NRF9 147 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 AATFQ9NY61 560 aaKnown RBP eCLIP2.09□□□□□ -2.07
COPS3-213ENST00000577210 CNOT2Q9NZN8 540 aaKnown RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 ERVK-18Q9QC07 812 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 TRIM10Q9UDY6 481 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 PILRAQ9UKJ1 303 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 PLA2G4CQ9UP65 541 aa2.09□□□□□ -2.07
COPS3-213ENST00000577210 MRPL11Q9Y3B7 192 aaKnown RBP2.09□□□□□ -2.07
COPS3-213ENST00000577210 COL2A1P02458 1487 aaPredicted RBP2.08□□□□□ -2.08
COPS3-213ENST00000577210 COL5A2P05997 1499 aaPredicted RBP2.08□□□□□ -2.08
COPS3-213ENST00000577210 FGD5Q6ZNL6 1462 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 ATAD2BQ9ULI0 1458 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 RAD54L2Q9Y4B4 1467 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 TRGV8A0A0C4DH27 118 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 A0A1B0GU03 582 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 IGLON5A6NGN9 336 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 YJEFN3A6XGL0 299 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 SSX5O60225 188 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 SNAP91O60641 907 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 LRCH4O75427 683 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 STBD1O95210 358 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 OR6A2O95222 327 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 CPNE6O95741 557 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 AK1P00568 194 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 IGHG1P01857 330 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 PROS1P07225 676 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 GSTA1P08263 222 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 KRT13P13646 458 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 GNSP15586 552 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 PRPHP41219 470 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 ASMTP46597 345 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 TNFSF10P50591 281 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 GEMP55040 296 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 TRA2BP62995 288 aaKnown RBP2.08□□□□□ -2.08
COPS3-213ENST00000577210 HMGN5P82970 282 aaKnown RBP2.08□□□□□ -2.08
COPS3-213ENST00000577210 GABPB1Q06547 395 aaPredicted RBP2.08□□□□□ -2.08
COPS3-213ENST00000577210 DPYSQ14117 519 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 HEPACAMQ14CZ8 416 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 KNOP1Q1ED39 458 aaKnown RBP2.08□□□□□ -2.08
COPS3-213ENST00000577210 KRTAP27-1Q3LI81 207 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 POM121L1PQ3SYA9 428 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 USH1GQ495M9 461 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 C12orf60Q5U649 245 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 REP15Q6BDI9 236 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 RTL6Q6ICC9 239 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 FBXL22Q6P050 247 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 DLEU7Q6UYE1 221 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 ZNF730Q6ZMV8 503 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 ASRGL1Q7L266 308 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 MYPOPQ86VE0 399 aaPredicted RBP2.08□□□□□ -2.08
COPS3-213ENST00000577210 VPS36Q86VN1 386 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 CARM1Q86X55 608 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 CACUL1Q86Y37 369 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 TBC1D21Q8IYX1 336 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 ARL14Q8N4G2 192 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 SAMD12Q8N8I0 201 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 C4orf32Q8N8J7 132 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 RDH11Q8TC12 318 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 MIPOL1Q8TD10 442 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 GLYATL1Q969I3 302 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 SLCO4A1Q96BD0 722 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 ZNF597Q96LX8 424 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 ERGIC2Q96RQ1 377 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 KCNK16Q96T55 309 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 DCTN5Q9BTE1 182 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 THUMPD2Q9BTF0 503 aaKnown RBP2.08□□□□□ -2.08
COPS3-213ENST00000577210 RPP25Q9BUL9 199 aaKnown RBP2.08□□□□□ -2.08
COPS3-213ENST00000577210 LRRCC1Q9C099 1032 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 NACA2Q9H009 215 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 WWP1Q9H0M0 922 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 DCLRE1BQ9H816 532 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 WDR41Q9HAD4 459 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 GDF3Q9NR23 364 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 DEPPQ9NTK1 212 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 SLC35D1Q9NTN3 355 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 PIGVQ9NUD9 493 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 DDX28Q9NUL7 540 aaKnown RBP2.08□□□□□ -2.08
COPS3-213ENST00000577210 ANKMY1Q9P2S6 941 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 MRTO4Q9UKD2 239 aaKnown RBP2.08□□□□□ -2.08
COPS3-213ENST00000577210 KLK13Q9UKR3 277 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 SPATA2Q9UM82 520 aa2.08□□□□□ -2.08
COPS3-213ENST00000577210 RABL2BQ9UNT1 228 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms