RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-215	ENST00000572905	ZG16	O60844	167 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	NOL3	O60936	208 aa	Known RBP	4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	GSTA1	P08263	222 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	SELE	P16581	610 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	UGT1A4	P22310	534 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	PRDX2	P32119	198 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	ID1	P41134	155 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	RPS4X	P62701	263 aa	Known RBP	4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	RPS27A	P62979	156 aa	Known RBP	4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	SRPX	P78539	464 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	CALCOCO2	Q13137	446 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	NECTIN1	Q15223	517 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	LDLRAP1	Q5SW96	308 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	GOLGA7	Q7Z5G4	137 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	KCNMB4	Q86W47	210 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	CERS5	Q8N5B7	392 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	WDSUB1	Q8N9V3	476 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	AQP11	Q8NBQ7	271 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	ZBTB44	Q8NCP5	570 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	NCLN	Q969V3	563 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	PNPLA2	Q96AD5	504 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	ANKRD27	Q96NW4	1050 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	ACCS	Q96QU6	501 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	TRIM51	Q9BSJ1	452 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	NDUFAF3	Q9BU61	184 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	WRAP53	Q9BUR4	548 aa	Known RBP	4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	MCRIP2	Q9BUT9	160 aa	Known RBP	4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	STRADB	Q9C0K7	418 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	LIN28A	Q9H9Z2	209 aa	Known RBP	4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	DEPP	Q9NTK1	212 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	THEG	Q9P2T0	379 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	EIF3K	Q9UBQ5	218 aa	Known RBP	4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	MIOX	Q9UGB7	285 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	TUBGCP4	Q9UGJ1	667 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	ZNF175	Q9Y473	711 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	ATG4B	Q9Y4P1	393 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	AP1M2	Q9Y6Q5	423 aa		4.26	□□□□□ -1.73
TOM1L1-215	ENST00000572905	AFF2	P51816	1311 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	FAM230A	A0A1W2PPH8	454 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	MEX3A	A1L020	520 aa	Known RBP	4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	BCLAF3	A2AJT9	711 aa	Known RBP	4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	ZNF724	A8MTY0	619 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	NDC80	O14777	642 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	CLDN3	O15551	220 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	ADAM12	O43184	909 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	DUSP11	O75319	330 aa	Known RBP	4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	SCGB2A1	O75556	95 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	GUCA1C	O95843	209 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	HEXB	P07686	556 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	RNF224	P0DH78	156 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	FUT1	P19526	365 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	MTTP	P55157	894 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	FKBP3	Q00688	224 aa	Known RBP	4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	HKDC1	Q2TB90	917 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	MUC21	Q5SSG8	566 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	RHBDD2	Q6NTF9	364 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	ADAM5	Q6NVV9	412 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	DPY19L2P2	Q6ZN68	376 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	VPS36	Q86VN1	386 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	CARM1	Q86X55	608 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	BCORP1	Q8N888	145 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	BANP	Q8N9N5	519 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	CHDH	Q8NE62	594 aa	Predicted RBP	4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	OR1K1	Q8NGR3	316 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	CHPT1	Q8WUD6	406 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	PTPRU	Q92729	1446 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	CAPNS2	Q96L46	248 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	NLN	Q9BYT8	704 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	MOB1A	Q9H8S9	216 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	VAT1L	Q9HCJ6	419 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	THYN1	Q9P016	225 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	MGAT4B	Q9UQ53	548 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	NIP7	Q9Y221	180 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	KIF3A	Q9Y496	699 aa		4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.25	□□□□□ -1.73
TOM1L1-215	ENST00000572905	NOTCH3	Q9UM47	2321 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	NCAPD2	Q15021	1401 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	IGLON5	A6NGN9	336 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905		K7EPI3	171 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	ZNF749	O43361	778 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	IDH3B	O43837	385 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	IFNB1	P01574	187 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	RRAS	P10301	218 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	PDZK1IP1	Q13113	114 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	ZNF146	Q15072	292 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	ZSWIM7	Q19AV6	140 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	AFTPH	Q6ULP2	937 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	AMZ2	Q86W34	360 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	GPBP1	Q86WP2	473 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	MISP	Q8IVT2	679 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	PYROXD2	Q8N2H3	581 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	RELL2	Q8NC24	303 aa	Predicted RBP	4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	ZNF397	Q8NF99	534 aa	Predicted RBP	4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	OR52B4	Q8NGK2	314 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	SELENOM	Q8WWX9	145 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	SYAP1	Q96A49	352 aa	Predicted RBP	4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	PINX1	Q96BK5	328 aa	Known RBP	4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	RCHY1	Q96PM5	261 aa		4.24	□□□□□ -1.73
TOM1L1-215	ENST00000572905	RAB11FIP5	Q9BXF6	653 aa		4.24	□□□□□ -1.73

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