RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 LCATP04180 440 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 NR2F1P10589 423 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 CCNB1P14635 433 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 TMEM11P17152 192 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 PTGER4P35408 488 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 CAMPP49913 170 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 PEX5P50542 639 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 VAMP7P51809 220 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 ARF5P84085 180 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 GPR18Q14330 331 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 WHAMMP3Q1A5X7 153 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 KNOP1Q1ED39 458 aaKnown RBP5.04□□□□□ -1.6
SF3B3-214ENST00000572365 MYLK3Q32MK0 819 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 CCDC40Q4G0X9 1142 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 GDPD4Q6W3E5 623 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 PQLC2Q6ZP29 291 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 CFAP77Q6ZQR2 320 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 CCDC80Q76M96 950 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 ZNF367Q7RTV3 350 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 TGIF2LYQ8IUE0 185 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 ARFGAP2Q8N6H7 521 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 ST6GALNAC3Q8NDV1 305 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 DENND6BQ8NEG7 585 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 OR14L1PQ8NHC6 308 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 CFAP61Q8NHU2 1237 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 ELMOD3Q96FG2 381 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 URB1-AS1Q96HZ7 61 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 SERPINB11Q96P15 392 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 TGM7Q96PF1 710 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 TMEM121Q9BTD3 319 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 MLPHQ9BV36 600 aaPredicted RBP5.04□□□□□ -1.6
SF3B3-214ENST00000572365 WDR26Q9H7D7 661 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 FGF21Q9NSA1 209 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 DDIT4Q9NX09 232 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 ARHGEF38Q9NXL2 777 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 UTP6Q9NYH9 597 aaKnown RBP5.04□□□□□ -1.6
SF3B3-214ENST00000572365 SLC12A6Q9UHW9 1150 aa5.04□□□□□ -1.6
SF3B3-214ENST00000572365 FARSAQ9Y285 508 aaKnown RBP5.04□□□□□ -1.6
SF3B3-214ENST00000572365 NCOA6Q14686 2063 aaPredicted RBP5.04□□□□□ -1.6
SF3B3-214ENST00000572365 HRNRQ86YZ3 2850 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 KDM4EB2RXH2 506 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 AKR1B15C9JRZ8 316 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 CACNB4O00305 520 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 O00370 1275 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 E2F3O00716 465 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 KCNN4O15554 427 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 GRID2O43424 1007 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 HS6ST1O60243 411 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 JRKO75564 520 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 ERAL1O75616 437 aaKnown RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 ZMPSTE24O75844 475 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 RECQL5O94762 991 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 MAOAP21397 527 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 PTPN4P29074 926 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 SSTR2P30874 369 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 OR1E1P30953 314 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 ACTR1BP42025 376 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 ENTPD1P49961 510 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 AP3M2P53677 418 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 ACTR1AP61163 376 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 IFI35P80217 286 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 MRPS25P82663 173 aaKnown RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 CCZ1BP86790 482 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 CCZ1P86791 482 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 ACSM2AQ08AH3 577 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 TWIST1Q15672 202 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 CEBPEQ15744 281 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 ETFDHQ16134 617 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 MMEL1Q495T6 779 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 HHATQ5VTY9 493 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 ACSM2BQ68CK6 577 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 PWWP2BQ6NUJ5 590 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 FAM92BQ6ZTR7 304 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 TSPAN33Q86UF1 283 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 C17orf82Q86X59 251 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 DEFB106AQ8N104 65 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 OR10G6Q8NH81 332 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 SPATA3Q8NHX4 192 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 FAM81AQ8TBF8 368 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 SLC37A2Q8TED4 501 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 MR1Q95460 341 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 DHX58Q96C10 678 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 SPDL1Q96EA4 605 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 HMCESQ96FZ2 354 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 CNDP1Q96KN2 507 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 HARBI1Q96MB7 349 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 LLPHQ9BRT6 129 aaKnown RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 C1QTNF7Q9BXJ2 289 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 TEX12Q9BXU0 123 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 CAPS2Q9BXY5 557 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 PARD6BQ9BYG5 372 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 PLK3Q9H4B4 646 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 PLAC1Q9HBJ0 212 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 CHST11Q9NPF2 352 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 HINT3Q9NQE9 182 aaKnown RBP5.03□□□□□ -1.6
SF3B3-214ENST00000572365 POT1Q9NUX5 634 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 DMAC2Q9NW81 257 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 OR6C3Q9NZP0 311 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 IL36RNQ9UBH0 155 aa5.03□□□□□ -1.6
SF3B3-214ENST00000572365 CIDEBQ9UHD4 219 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms